Pairwise Alignments

Query, 301 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 296 a.a., Response regulator from Pseudomonas putida KT2440

 Score =  448 bits (1152), Expect = e-131
 Identities = 225/301 (74%), Positives = 257/301 (85%), Gaps = 5/301 (1%)

Query: 1   MSKVSVLVVDDASFIRDLVKKCLRNYFPGIKLEDAVNGKKAQAILMRESFDLVLCDWEMP 60
           MSKV+VLVVDDA FIRDLV+KCLRN FPG+ ++DA+NG+KA A+L +E+FDLVLCDWEMP
Sbjct: 1   MSKVNVLVVDDAPFIRDLVRKCLRNAFPGMAIDDAINGRKAMAMLGKEAFDLVLCDWEMP 60

Query: 61  EMSGLELLTWCREQPHLKAMPFVMVTSRGDKENVVQAIQAGVSGYVSKPFTNEQLLNKVK 120
           EMSGLELLTWCR+QP LK + F+MVTSRGDKENV+QAIQAGVS +V KPFTNEQLL KVK
Sbjct: 61  EMSGLELLTWCRQQPALKNLQFIMVTSRGDKENVIQAIQAGVSDFVGKPFTNEQLLTKVK 120

Query: 121 QALHKIGRLDALVASAPTKMNSAFGNDSLSALTGGKPEAARAAPVAAAPVPNKGLLNSPP 180
           +AL KIG+LD+L+A  P + N AF NDSL+ALT GKPEA + A  A  P P K L+ +P 
Sbjct: 121 KALTKIGKLDSLMAIGPARANPAFANDSLNALTAGKPEAVKVA--APTPAPAKPLVAAP- 177

Query: 181 VQAPSAAPAGGRGQGQLRLSSGSQQCVIKALSIKEALLVVRRGEVLPQVLESAVLDLEQG 240
             AP+A    GRGQGQLRL+SG Q CVIKALS+KEALLVVRR E LPQVLE AVLDLEQG
Sbjct: 178 --APAAPAPSGRGQGQLRLASGMQPCVIKALSLKEALLVVRRSEALPQVLEGAVLDLEQG 235

Query: 241 ENAEVARLNGYLHAIVAFEPKPDSDWLQLTFRFIDQDAQKLDYISRLIARGTAQKHFVPG 300
           E+AEVARLNGYLHA+ A EPKPDSDWLQLTF+F+DQDAQKLDY+SRLIARGTAQKHF PG
Sbjct: 236 ESAEVARLNGYLHAVAALEPKPDSDWLQLTFKFVDQDAQKLDYLSRLIARGTAQKHFTPG 295

Query: 301 A 301
           A
Sbjct: 296 A 296