Pairwise Alignments

Query, 646 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

Subject, 725 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

 Score =  333 bits (855), Expect = 1e-95
 Identities = 199/611 (32%), Positives = 315/611 (51%), Gaps = 30/611 (4%)

Query: 30  EELGRLFNYELQLTSLDANIDLNQLLGKPMSVGLQLADGGERHFHGIVARCSQNIDQGQF 89
           E +   F  +L+L S + ++D  QLL KP+   L   +   R+ HG+V+  SQ       
Sbjct: 29  EAISSPFRLQLELVSFEDDVDFAQLLDKPVLFTLWQGERPLRYVHGLVSTFSQGETGFDR 88

Query: 90  ASYQVTLRPWLWLLSRTSDCRIFQNLSIPQIIKQVFRDLGFSDFEDALSRPYREWEYCVQ 149
             Y+  + P L      S+ RIFQ  ++PQI++ + +  G + +E     P++  E+CVQ
Sbjct: 89  TRYRALVEPVLARAGLRSNWRIFQQKTVPQILEIMLKRQGVNAYELKCLDPHQVREFCVQ 148

Query: 150 YRETSFDFVSRLMEQEGIYYFFRHEQDRHVLVLADAY------------------GAHTT 191
             ET  DF++RL  +EGI Y F H   +H+L++ D                    G H  
Sbjct: 149 AGETDLDFMARLAAEEGIVYRFDHTPKQHLLIITDRLLALGQISRGAIKTDDEDEGFHND 208

Query: 192 VPGYASIPYYPKDEQQRERDHMHNWHLAHEVQPGSMELNDYDFQRPSASIDVRSA-MPRP 250
             G   + Y       + R  +     + +V+       DY F  P    + ++      
Sbjct: 209 DVGPDQVLYRSVGGGDQARPCLRRLRYSEQVRTARQVQRDYTFTHPQYRQEHQAYDNSNT 268

Query: 251 HTAGDYPLYDYPGTYVQSEDGEHYARTRIEALQTLHEQIEFNGNARGLGSGHLFSLTGFS 310
           H + +Y  +DYPG Y +   G  +  TR+ AL+      E  G+   L  G  F+L    
Sbjct: 269 HQSLNYERFDYPGRYKRDAVGVPFTATRLTALRHDARIAEVEGDDVRLQPGLSFTLIEHP 328

Query: 311 RQDQNREYLIV-----GCRYYIVQESLESGGGSGSAQFESSLTCIDAQQSFRPLANTHRP 365
           R+D N  +  V     G ++  +QE  E+       +++     +  +  +RP A   +P
Sbjct: 329 REDLNVHWRTVSVHHEGTQFTSLQE--EAADSQQGTRYKQEALLVPGRTEWRP-APLPKP 385

Query: 366 IVKGPQTALVVGPKGEEIWTDQYGRVKVHFYWDRHDQSNENSSCWIRVSQSWAGKNWGSM 425
            + GP  A VVGPKGEEI+ DQ+GRVKV F WDR  ++NE SSCW+RVSQ WAG +WGSM
Sbjct: 386 RIDGPHMATVVGPKGEEIYCDQWGRVKVSFPWDRESENNEFSSCWVRVSQGWAGGSWGSM 445

Query: 426 QIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYDLPENATQSGMKSRSSKGGSPANF 485
            IPRIGQ+VI+ ++  DPD+P+ITGR Y   Q  PYDLPE+ T+  +KS++ KG     F
Sbjct: 446 AIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLPPYDLPEHKTRMTIKSQTHKG---EGF 502

Query: 486 NEIRMEDKKGLEQLYIHAERNQDIVVEVDESHSVGHDRNKSIGHNETVTIGNNRLRIVKQ 545
           NE+R ED+ G ++++IHAER+Q+ +V+ DE+  VG+DR + +  +ET++IG +R   + +
Sbjct: 503 NELRFEDELGRQEVFIHAERDQNNIVKHDETTRVGNDRTERVERDETISIGQDRREDIAR 562

Query: 546 EDILSVGQKKTDSISQSYVIEVGENLRLVCGESILELNASGQINLTGVQISFYASGDAEF 605
           ++ + +GQ +   I     + +G N R+  G+  +E   + + ++T    +    G  E 
Sbjct: 563 DESVGIGQNRVHEIGNDDSLSIGRNHRITTGKDRIEQVGNHRQDITKANHTVEIGGHREQ 622

Query: 606 NTGGVLHLNNG 616
              G   L  G
Sbjct: 623 VVAGHSTLQTG 633