Pairwise Alignments

Query, 646 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

Subject, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  399 bits (1025), Expect = e-115
 Identities = 229/635 (36%), Positives = 348/635 (54%), Gaps = 44/635 (6%)

Query: 1   MLFNQASRLAK--ITSPLGPDVLLLNEMGGGEELGRLFNYELQLTSLDANIDLNQLLGKP 58
           ML  Q  RL K  I +    D  LL    G EEL +L+ ++L L S  +++ L  L+G  
Sbjct: 8   MLAPQNRRLFKLNILTQTANDEFLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSLIGSQ 67

Query: 59  MSVGLQLADGGERHFHGIVARCSQNIDQGQFASYQVTLRPWLWLLSRTSDCRIFQNLSIP 118
            +V ++L++G  RH +G V R S     G +  Y   L PWLW+L+   D RIFQ  S+ 
Sbjct: 68  ATVEIELSNGSFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQ 127

Query: 119 QIIKQVFRDLG-FSDFEDALSRPYREWEYCVQYRETSFDFVSRLMEQEGIYYFFRHEQDR 177
            ++ +VF   G  + +E  +S+P +   Y  QYRE+ F+FV RL+E EG++Y+F H  D 
Sbjct: 128 AVVSEVFAGFGTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADS 187

Query: 178 HVLVLADAYGAHTTVPGYASIPYYPKDEQQRERDHMHNWHLAHEVQPGSMELNDYDFQRP 237
           H++V+ D       +P    I Y+     +   D +  W    ++Q G + +  +D+++P
Sbjct: 188 HLMVITDDSSTLLPLPEQPQIRYHSASVTETA-DSITQWQSTRQLQSGQIAVRTFDYRQP 246

Query: 238 SASIDVRSAMPRPHTAGD---YPLYDYPGTYVQS--EDGEHYARTRIEALQTLHEQIEFN 292
              + V   M   +  GD   + +YD+PG Y     EDGE   R RIEAL+ + +     
Sbjct: 247 RNFLPV--TMQSLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGE 304

Query: 293 GNARGLGSGHLFSLTGFSRQD----QNREYLIVGCRYYIVQESLESGGGSG-----SAQF 343
            N R +  G+ F LT     D    +NR++L++         S+E  G +       A +
Sbjct: 305 SNCRAMKPGYTFELTQHYLHDTGAAENRKFLLL---------SVEHRGSNNYMTGDQAGY 355

Query: 344 ESSLTCIDAQQSFRPLANTHRPIVKGPQTALVVGPKGEEIWTDQYGRVKVHFYWDRHDQS 403
            +   C+  + ++RP  NT +P++ GPQTA+VVGP GEEI+TD+ GRVK+ F+WDR  Q 
Sbjct: 356 VNRFVCVRKKIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQF 415

Query: 404 NENSSCWIRVSQSWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYDL 463
           N+ SSCW+RV+QS A   +GS+QIPR+G EV+V FL+G+PDRP+I G +YN+  T P+ L
Sbjct: 416 NDQSSCWVRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSL 475

Query: 464 PENATQSGMKSRSSKG-GSPANFNEIRMEDKKGLEQLYIHAERNQDIVVEVDESHSVGHD 522
           P N TQSG  +RS KG G  ANF   R EDK G EQ+ +HAERN D  +E+DE+H V   
Sbjct: 476 PANKTQSGFLTRSMKGDGGTANF--FRFEDKAGAEQIIMHAERNMDTEIELDETHDV--- 530

Query: 523 RNKSIGHNETVTIGNNRLRIVKQEDILSV--GQKKTDSISQSYVIEVGENLRLVCGESIL 580
                G+N ++T+G      VK++ ++ V  G       +Q   +   +++ L  G+S +
Sbjct: 531 -----GNNRSITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVAAKQHIILQVGDSSI 585

Query: 581 ELNASGQINLTGVQISFYASGDAEFNTGGVLHLNN 615
            L   G I + G ++    S D    TG  + +N+
Sbjct: 586 TLTPEG-IEIKG-KVIVTTSTDTTQITGAAVRIND 618