Pairwise Alignments

Query, 347 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 338 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 85/287 (29%), Positives = 124/287 (43%), Gaps = 21/287 (7%)

Query: 24  EYDFFQALRRIE-CESPDL-PRLGHS-----LRLADDPLRLGQQADCTFAPATLASVD-- 74
           +Y+FFQ L R+      DL PR         +RLA DP RL      TF  + +   +  
Sbjct: 22  QYNFFQLLERLHGLHGDDLEPRWADEATRLRVRLASDP-RL------TFPVSDVYKAERM 74

Query: 75  PGGDGKPARLEQFFFGLGGPNGPLPLHITEYVRERQRNNADSTSKQFLDVFHHRLLSLFY 134
           PG D +  R+   F GL G + PLP +  E V              F D F+H LLSL +
Sbjct: 75  PGEDER-YRVCTTFMGLHGTDSPLPTYYLEQVAYEHAQGV-GVRPAFFDFFNHYLLSLLH 132

Query: 135 RAWAEARPTVSHDRPDDDYWSARLAALSGRGMPSLLNQGLIPDTAKLHYSGHLSAQTRYP 194
           R W + R  +       D +S  + AL G     L     +P +  L ++G ++++ R P
Sbjct: 133 RIWRKYRYYIRFQPGARDGFSQYMFALLGLNDKQLRGDTTLPWSRLLSFAGVIASRGRAP 192

Query: 195 DGLKAILGEYFGLP-VEIEEYVGQWLELPERSRVSV--SANRLGVDFCLGSFVWDRQHKF 251
             +  I+   F L  V+I E+  + +    +  VS+  S   LG  F +GS    R  KF
Sbjct: 193 GTVAGIIAHCFDLTHVQIREFETRTVTTNSKQLVSLGRSNGELGSTFMVGSRTRTRSSKF 252

Query: 252 RIRLGPLTLEDYMGMLPGQQPFNELVAWVAEYLGHELDWDLNLVLQQ 298
            I +  L       +LP    F  L A +   L   L +DL L L+Q
Sbjct: 253 TILISELDQAQLHDLLPSGINFGRLRALIDFLLRDGLAYDLELRLKQ 299