Pairwise Alignments

Query, 347 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 338 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 83/293 (28%), Positives = 123/293 (41%), Gaps = 17/293 (5%)

Query: 16  DAMHQEPWEYDFFQALRRIE-CESPDL-PR-----LGHSLRLADDPLRLGQQADCTFAPA 68
           D +  E  +Y+FFQ L R+      DL PR         +RLA DP      +D   A  
Sbjct: 14  DKLLCEAHQYNFFQLLERLHGLHGDDLEPRWPDKATRRRVRLACDPRLTFPVSDVYKAQR 73

Query: 69  TLASVDPGGDGKPARLEQFFFGLGGPNGPLPLHITEYVRERQRNNADSTSKQFLDVFHHR 128
             A      +    R+   F GL G + PLP +  E V     +        F D F+H 
Sbjct: 74  MPA------EEARYRIIATFLGLHGTDSPLPTYYLEQVAYEHAHGI-GVRPAFFDFFNHY 126

Query: 129 LLSLFYRAWAEARPTVSHDRPDDDYWSARLAALSGRGMPSLLNQGLIPDTAKLHYSGHLS 188
           LLSL +R W + R  +       D +S  + AL G     L     +P +  L ++G ++
Sbjct: 127 LLSLLHRIWRKYRYYIRFQPGASDGFSQYVFALLGLNDKQLRGDTALPWSRLLSFAGVIA 186

Query: 189 AQTRYPDGLKAILGEYFGL-PVEIEEYVGQWLELPERSRVSV--SANRLGVDFCLGSFVW 245
           +++R P  +  I+   F L  V I E+  + +  P R   S+  +  +LG  F +GS   
Sbjct: 187 SRSRAPGTVAGIIAHCFDLKQVHIREFETRSVVTPSRQLASLGRTNGQLGSTFMIGSRTR 246

Query: 246 DRQHKFRIRLGPLTLEDYMGMLPGQQPFNELVAWVAEYLGHELDWDLNLVLQQ 298
            R  KF I +  L       +LP    F  L A +   L   L +DL L L+Q
Sbjct: 247 TRSSKFTIVISELDQTQLRDLLPSGINFGRLRALIDFLLRDGLAYDLELRLKQ 299