Pairwise Alignments

Query, 162 a.a., Hcp1 family type VI secretion system effector from Pseudomonas simiae WCS417

Subject, 180 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  114 bits (286), Expect = 7e-31
 Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 11/169 (6%)

Query: 1   MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMAQSGNMHVGGGGGAG--KVNIQDLSL 58
           MA D +I+I  I GE +D+ HKD I+VL + +G  Q+ +      GGA   +V + D  +
Sbjct: 9   MAFDAYIQIDGIPGEVLDEKHKDWIEVLGYEYGATQATSATASSSGGASSERVALSDFKI 68

Query: 59  TKYVDKASPNLMMHCASGKHIDKVKLTVRKAGGESQVEYMVINLEEVLVTSLS--TGG-- 114
            K VDKAS  L  HC +GKHI K+KL V +AGG+ +V Y+ I++EEV+V+S+    GG  
Sbjct: 69  RKAVDKASAKLFEHCCTGKHIAKLKLNVNRAGGD-KVTYLTIDMEEVVVSSVKFVAGGNQ 127

Query: 115 SGTD----DRLTENVTLNFAQVMVDYQPQKADGTKDGGAIKFGWNIRSN 159
           SG D    D   E ++ NFA++   Y  Q     + GG I  GW+  +N
Sbjct: 128 SGEDKAVSDLPVEEISFNFARIKTTYTQQNRTDGQAGGNIVGGWDRTAN 176