Pairwise Alignments

Query, 444 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 409 a.a., type VI secretion system-associated FHA domain protein TagH from Dickeya dianthicola ME23

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 14/194 (7%)

Query: 254 LQAFLRGAGLDQLRLDKAQAEAQMESIGRSYRLMVEGLIDVLRARASLKGEFRMQQTMIQ 313
           L   LRG G+     D+ Q    +E +GRS + MVEGL+ +   +A+L        T ++
Sbjct: 223 LAPLLRGLGVSLNTGDEQQRREMLEEVGRSLKAMVEGLLTLQADQAAL------ADTHLR 276

Query: 314 PAENNPLKFAPNADEALLLLLRHG-NQAFMAPDLAVRDSFNDLRAHQLAVMAGVEAAIKH 372
           P E+NPL+   +  + L LL     +   ++   A+ +  ++++AH  A    +  A++ 
Sbjct: 277 PIEDNPLRLGLDYTDTLSLLFADDKSPVHLSAPAAISEVLSNMQAHHRANQQAIAVALES 336

Query: 373 LLSRFEPAQL---EERMGKPGGLSSLFNGSRQAQYWQQFTELYSNISREAQEDFQDLFGR 429
           +L  F PA L    E   + G   +L +G      WQ +   Y  ++   Q+ FQ LF +
Sbjct: 337 ILQAFSPAALLGRFEHYRRSGERQALDDG----WAWQMYQHYYRELTSPRQQGFQKLFHQ 392

Query: 430 EFSRAYEEHSARQR 443
            +++AY+    +Q+
Sbjct: 393 VYAQAYDRAVRQQQ 406



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%)

Query: 30  IGRSSDNDWVLPDPERLVSSQHCVIQYKDGRYYLTDNSTNGVELVKAGIR-MRRGNSELL 88
           +G S  + W L D    V  +H  I+ +DG + + D S  G   +   +  + R     L
Sbjct: 34  LGASEKDQWQLRDRLGAVLPEHAGIELQDGHFCVCDLS--GQTFINGALSPIGRDRRVCL 91

Query: 89  QDGELIRIGDYEIQARIDFNVQSIDSQPFTGDAP 122
           + G+ + IG + +   ++   +  D     G  P
Sbjct: 92  EHGDELVIGPFRLGVYLEDPAREQDIDQVLGQRP 125