Pairwise Alignments

Query, 444 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 442 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  293 bits (750), Expect = 7e-84
 Identities = 165/441 (37%), Positives = 252/441 (57%), Gaps = 5/441 (1%)

Query: 5   NRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGSWGFSELLIDQGLLAQGKLAIVS 64
           + V+W EGM +  QH Q +DRY    ++ R+R LS+ +WGF  L +D   L  GK+ +  
Sbjct: 4   HNVIWQEGMLLRPQHLQHNDRYYHRQLN-RTRLLSSDAWGFLTLDLDLQYLNLGKVVVNQ 62

Query: 65  ARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEALEAARY 124
           A G+LPDG+ F +    + P  L +  N     VYLALPL      +   + ++   ARY
Sbjct: 63  ASGVLPDGSLFEL-SGAMEPLVLQVPANAGRQAVYLALPLATENQVEVRRKEQSDVLARY 121

Query: 125 VSQVREVRDDNAPFENRAPVAVGARALRLLTAQDGISD--YAAIGLVRIKEKRADRALVL 182
           V+   E+ D NA  ++R  +      LRL+  + G SD  Y  + + ++++   +  + L
Sbjct: 122 VACETEIGDSNAGADSRCQINCARPDLRLMLGE-GPSDAFYVKLQVAQVQDSTREDGVSL 180

Query: 183 DDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQLVN 242
           D  ++P  + +  +  +++   E++ LL  RG+A+A R+  SGA   +++ DF++LQL+N
Sbjct: 181 DADFVPTFIYLQGTGYVSSCIKEVISLLATRGDAIAARIQGSGASTGAQVGDFLMLQLIN 240

Query: 243 RAQPLIQHLSQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLALSFAPVM 302
           RA+ +++H    + + PER + EL+S+ GE STF+   +R Q    Y+H D   SF  +M
Sbjct: 241 RAELILRHYLVQAQVRPERLYRELLSILGELSTFANDNKRAQLAVHYRHGDQGASFRGLM 300

Query: 303 AALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLLDSASFILVVRADVPGETLRARF 362
             LR  LS +++  A  + + ++ YGV V  ++D  LL +A+FIL   A    E LR R 
Sbjct: 301 EGLRTVLSSVLEQHAIELVLQQRQYGVLVCPVSDLKLLGTATFILAATAQCDSEELRHRL 360

Query: 363 GQQSKVGSVEHIRDLVNLQLPGITLLPLPVAPRQLPYHAGSTYYELDRGSEAWQQLGNSG 422
               K+G VE IR+LVNL L GI + PLPVAPRQ+PYHA  TY+ L+       QL  SG
Sbjct: 361 PAHLKIGPVERIRELVNLHLAGIKVQPLPVAPRQIPYHAAKTYFMLELSPRDIAQLEQSG 420

Query: 423 GFAFHIAGQFPGLNLAFWAIR 443
           GFAFH +G+F  L L FWAIR
Sbjct: 421 GFAFHASGEFAELELNFWAIR 441