Pairwise Alignments

Query, 234 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 648 a.a., fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI) from Escherichia coli BW25113

 Score =  111 bits (277), Expect = 4e-29
 Identities = 81/227 (35%), Positives = 119/227 (52%), Gaps = 14/227 (6%)

Query: 1   MLNLSAVHKSRGVGSQRYSLVIP-ALALRAGEQLAIVGPSGCGKSTLLDLLALVLAPDQV 59
           +L L  + +S   G ++  ++   +L + AGE +AIVG SG GKSTL+++L   L     
Sbjct: 4   LLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGC-LDKATS 62

Query: 60  GQFEFHQQDIAGLWHGDQQSTLAALRSQHLGYVLQTGGLLGFLDVRGNIALSRQLLGLKD 119
           G +    QD+A L        LA LR +H G++ Q   LL  L    N+ +     GL+ 
Sbjct: 63  GTYRVAGQDVATL----DADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLER 118

Query: 120 DGSVAR---LAEQLEISDQLTKKPTALSVGQRQRVSCARALAHAPQLVLADEPTASLDPL 176
              + R   L ++L + D+    P  LS GQ+QRVS ARAL +  Q++LADEPT +LD  
Sbjct: 119 KQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSH 178

Query: 177 NAERVMQALLAQAREHRAACVIATHDEPLARASGLQVRRISCRRDAD 223
           + E VM A+L Q R+     +I THD  +A     Q  R+   RD +
Sbjct: 179 SGEEVM-AILHQLRDRGHTVIIVTHDPQVA----AQAERVIEIRDGE 220