Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 290 a.a., conserved protein of unknown function containing an HDOD domain from Pseudomonas putida KT2440

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 8/218 (3%)

Query: 177 QAFTARRIQQRLEATIEIPPLADTAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWA 236
           Q  +A +IQQ L+  I IPP       +   +  P+  ++ I  ++  DP L+  ++   
Sbjct: 3   QELSAEQIQQALQG-ITIPPQPQIMVDLQFEQYMPDPDLETIAKLISQDPGLSGALLKLV 61

Query: 237 ASPYYASPGKIRSVEDAIVRVLGFDLVINLALGLALGKTLSLPKDHPHQSTPYWHQSIYT 296
            SP++    KI S++ A V +LG   +INL    ++   +S   +       +W  +   
Sbjct: 62  NSPHFGLSNKIGSIQRA-VNLLGSRSIINLINAQSIKGEMS--DETIVTLNRFWDTAQDV 118

Query: 297 AAVIEGLTRAMPRAQRPEAGLTYLAGLLHNFGYLLLAHVFPPHFSLICR-HLEVNPHLCH 355
           A     L +   R     A   Y  GL H+ G  L+   FP +  ++   + + +     
Sbjct: 119 AMTCLTLAK---RTGIQAADEAYTLGLFHDCGVPLMLKRFPDYMDVLEEAYAKADEETRV 175

Query: 356 SYVEQHLLGISREQIGAWLMRYWDMPDELSTALRFQHD 393
              E      +   +G +  + W +P+ LS A+   H+
Sbjct: 176 VDTENRTFNTNHSVVGYFTAKSWRLPEHLSAAIANHHN 213