Pairwise Alignments

Query, 337 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 355 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  532 bits (1371), Expect = e-156
 Identities = 274/335 (81%), Positives = 303/335 (90%), Gaps = 1/335 (0%)

Query: 3   TFSQRHVILLASYIIIFGGLLLVLPLKLLPSLLAGLLVFELVNMLTPQLQRLIEGRRARW 62
           TF+ R  I LAS II+  GLLL LPLKLLPSLLAGLLVFELVNMLTP+LQ L+ G+RARW
Sbjct: 22  TFTPRQ-ITLASLIIVMAGLLLALPLKLLPSLLAGLLVFELVNMLTPRLQPLLAGQRARW 80

Query: 63  LAVALLGTLIVSVLTLIFAGAISFLLHEAENPGASLDKFMGVVDRARGQLPPFIDAYLPA 122
           LAVALLGTL+VS LTL+ AGA SFLLHEAENPGASLDKFM +V+RAR QLPPFI+ YLPA
Sbjct: 81  LAVALLGTLVVSTLTLLIAGAFSFLLHEAENPGASLDKFMALVERARSQLPPFIEGYLPA 140

Query: 123 SAAEFRVAIGDWMSKHLSELQLVGKDAAHMFVTLLIGMVLGAIIALQRVPDLTKRKPLAA 182
           SAAEF+VAIGDW+  HLS+LQLVGK  AHMFVT+LIGM+LGAIIALQR+PD+++RKPLAA
Sbjct: 141 SAAEFKVAIGDWIKSHLSDLQLVGKGMAHMFVTMLIGMILGAIIALQRIPDISRRKPLAA 200

Query: 183 VLFDRLHLLVQAFRNIVFAQIKIAALNTAFTAVFLAVVLPLCGIHLPLTKTLIVLTFLLG 242
            LF+RL LLV+AFRNIVFAQIKI+ LNT FT +FLAVV+PL  +HLPLTKTLIVLTFLLG
Sbjct: 201 ALFERLSLLVKAFRNIVFAQIKISLLNTIFTGIFLAVVMPLFDVHLPLTKTLIVLTFLLG 260

Query: 243 LLPVIGNLMSNTLITIVALSLSIWVAVAALGYLIVIHKVEYFLNARIVGGQISAKSWELL 302
           LLPVIGNLMSNTLITIV LSLSIWVA AALGYL+VIHK+EYFLNARIVGGQISAK+WELL
Sbjct: 261 LLPVIGNLMSNTLITIVGLSLSIWVAAAALGYLVVIHKIEYFLNARIVGGQISAKAWELL 320

Query: 303 LAMLVFEAAFGLPGVVAGPIYYAYLKSELKLGGMV 337
           LAMLVFEAAFGLPGVVAGPIYYAYLKSELK   +V
Sbjct: 321 LAMLVFEAAFGLPGVVAGPIYYAYLKSELKRAELV 355