Pairwise Alignments

Query, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 721 a.a., bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase from Rhodanobacter sp000427505 FW510-R12

 Score =  698 bits (1801), Expect = 0.0
 Identities = 354/697 (50%), Positives = 486/697 (69%), Gaps = 12/697 (1%)

Query: 6   ALADRLSAYLGPDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQS 65
           AL +R+ AYL   QV+ V RA+    QAH GQ R+SGE Y+THP+AVA ILA++ +D ++
Sbjct: 21  ALKERI-AYLPEVQVDRVLRAFQLGAQAHAGQERKSGEPYITHPVAVAGILAELGLDTET 79

Query: 66  LMAAMLHDVIEDTGIAKEALSAQFGETVAELVDGVSKLTQMNFETKAEAQAENFQKMAMA 125
           ++AA+LHD +EDT +++E L+ +FGE VAELVDGV+KL +M F T+ EA AE+F+KM +A
Sbjct: 80  IIAAILHDTLEDTELSREMLATEFGEVVAELVDGVTKLDKMRFGTRQEADAESFRKMLLA 139

Query: 126 MARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHAIRIEFEDL 185
           MARDIRVIL+KLADRLHNMRTL       RRRIA+ETLEIYAPIA RLGM+  + E +DL
Sbjct: 140 MARDIRVILIKLADRLHNMRTLGAKDAPSRRRIARETLEIYAPIAQRLGMNKFKAELQDL 199

Query: 186 GFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSHCLAIDEIEGEVSGRQKHIYGIYK 245
           GF+A++P R   I + ++ A GNR+E + KIE +LS  L  D +   V GR K  + IY 
Sbjct: 200 GFRALYPDRYRVISERIRAALGNRREAMGKIEAALSARLVADHLPARVVGRIKSSWSIYS 259

Query: 246 KMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQS 305
           KMR + ++F ++MDVY FR++VD   +CY  LG VH LYKP+  RFKD+IAIPKANGYQS
Sbjct: 260 KMRNEHKSFAQLMDVYGFRVVVDSAMSCYMALGVVHALYKPVDRRFKDFIAIPKANGYQS 319

Query: 306 LHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQP-KGTHARARQWVKGVL 364
           LHT L G  G PIE+QIRT EM+ +A  G+AAHW YK+  D  P     ARAR+W+  ++
Sbjct: 320 LHTVLLGPFGAPIEVQIRTAEMDSVAERGVAAHWAYKT--DSGPANSAQARAREWLSSLV 377

Query: 365 EMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVHTDVGNSCIA 424
           +      +S EFIE+VKIDLFPDEVY+FTP+G I+ LP+ +TA+DFAYAVHTDVG+  +A
Sbjct: 378 DSSASTVSSSEFIENVKIDLFPDEVYLFTPRGDILSLPRNATALDFAYAVHTDVGDHAVA 437

Query: 425 CRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESI 484
            R++++L PL   L+SG  VEI++AP A PNPAWL  VVTGKART IR  LK  +  +++
Sbjct: 438 ARVDKKLLPLRTKLESGQLVEIITAPSAVPNPAWLEVVVTGKARTAIRQYLKHLQHEDAV 497

Query: 485 SLGERLLNKVLNGFDSALDKIPTERVQAMLHEYRQETIEDLLEDIGLGNRMAYVVARRLL 544
             G R+L++ L+   S+LD IP   +   L   + + +E+LL DI LGNRM  VVA +LL
Sbjct: 498 DFGHRMLDRALDAQGSSLDGIPPAVLDRFLETSKLKRLEELLSDIALGNRMPDVVASQLL 557

Query: 545 -------GEGEQLPSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDN 597
                  G+          + I G E  VLS+A CC P+PGD I+G+LS+GKG+VVH + 
Sbjct: 558 ASRGRKAGKPHTAAHAHEKIRITGAERGVLSFANCCHPLPGDEIIGYLSSGKGIVVHREE 617

Query: 598 CRNITEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAADGNIEKIS 657
           C N+ E+R +PE+C+ + W +DV G++  ELR+E+ ++ G++A +A+++ AAD NIE + 
Sbjct: 618 CPNVVELRKSPERCVAIEWDRDVQGDYRAELRIEVTNRPGVLATVAAAIAAADSNIENVE 677

Query: 658 MDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVI 694
             ERD   + +   + V +R HLA VI+++R  TGV+
Sbjct: 678 YVERDAVAATLLFALEVKNRKHLADVIRRVRR-TGVV 713