Pairwise Alignments

Query, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 746 a.a., Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I from Variovorax sp. SCN45

 Score =  333 bits (854), Expect = 2e-95
 Identities = 223/733 (30%), Positives = 357/733 (48%), Gaps = 48/733 (6%)

Query: 1   MPSIDALADRLSAYLGPDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMH 60
           M  +D      +A   P   N++ RA  +AE     +   +GE  + H  AVA I+A M 
Sbjct: 16  MAMVDYPLSAATAERSPVMENMLARARAFAEPLIADETLDTGENTLAHADAVAAIVAKMG 75

Query: 61  MDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDGVSKLTQMNFETK--------- 111
                  A+ L    +     +E ++  FG+  A L    +KL ++  + +         
Sbjct: 76  GSEAMQAASYLVYACQHLNRPQEVIAKVFGDNFAALAVETTKLVRVQEQARSAAQGHHIE 135

Query: 112 -AEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIA 170
            A AQ EN +KM +A +RD+RV++++LA RL  +R            +A+E+L+++AP+A
Sbjct: 136 GAGAQTENVRKMLLAFSRDLRVVMLRLASRLQTLRHAAASKQPAPEGVARESLQVFAPLA 195

Query: 171 NRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSHCLAIDEIE 230
           NRLG+  ++ E EDL F+ + P     I + +   R  R+  V ++   L   L  + ++
Sbjct: 196 NRLGIWQVKWEIEDLSFRFLEPETYKLIARLLDEKRIEREGHVEQLRSQLERELQNEGVK 255

Query: 231 GEVSGRQKHIYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGR 290
             V GR K+IY I KKMRGK   F ++ D+ A R++V  V  CY  L  VH+ ++P+   
Sbjct: 256 ATVQGRPKNIYSIVKKMRGKSLDFAQVFDILALRVVVSDVKDCYAALAWVHSHFQPIDEE 315

Query: 291 FKDYIAIPKANGYQSLHTT----LFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGD 346
           F DYIA PK NGYQSLHT     + G  G PIEIQIRT EM + A +G+AAHW YK +G 
Sbjct: 316 FDDYIARPKPNGYQSLHTVVRELVDGKPGKPIEIQIRTEEMHDHAEHGVAAHWAYKEAGH 375

Query: 347 EQPKGTHARARQWVKGVLEMQQRAGNSLEFIESVK-IDLFPDEVYVFTPKGRIMELPKGS 405
           +   G  A      K +  ++Q      +    ++   LF D +YV TP   I+ELP+G+
Sbjct: 376 KGYAGVWASGEYDAK-IAVLRQLLAWERDLSGGLQGQGLFDDRIYVLTPDAAIVELPQGA 434

Query: 406 TAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLN----F 461
           T VDFAY VHT +G+ C   R++  + PL+ PL +G TVEI++A    P+  WLN    +
Sbjct: 435 TPVDFAYTVHTTLGHRCRGARVDGAMVPLNTPLSNGQTVEIIAAKEGGPSRDWLNAELGY 494

Query: 462 VVTGKARTHIRHALKLQRRSESISLGERLLNKVLNGFDSALDKIPTERVQAMLHEYRQET 521
           + + +AR  +R     Q   E+++ G   + K+L       +     R++ +  +   ++
Sbjct: 495 LASHRARAKVRAWFNAQITHETVARGREAVEKLLQ-----REGKTAVRLEDLASQLGFKS 549

Query: 522 IEDLLEDIGLGNRMAYVVARRLLGEGEQLPSPE----------------GPLAIRGTEGL 565
            + L E +G  +  +      LL   E  P P+                G + + G   L
Sbjct: 550 ADHLFEVVG-KDEFSLRNIETLLRPPEPAPGPDDGVLIKKARGSEKSGKGGVLVVGVSSL 608

Query: 566 VLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRNI-TEIRHNPEKCIQLSWAKDVTGE- 623
           +   AKCC P P D I G ++ G G+ VH  +C N  T    + E+ I + W     G  
Sbjct: 609 MTQLAKCCKPAPPDSIRGFVTRGHGVSVHRSDCSNFRTMASKDNERVIDVEWGAPKKGAE 668

Query: 624 ---FNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHL 680
              + V++ VE   ++GL+  ++        N+  +      G  + +   V + D   L
Sbjct: 669 APVYAVDVAVEAADRQGLLRDISDVFAREKMNVIGVQTQSIKG-TAWMTFTVEIADAARL 727

Query: 681 ARVIKKLRALTGV 693
            +V+  + A+ GV
Sbjct: 728 TQVLGVVTAVIGV 740