Pairwise Alignments

Query, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 701 a.a., 'Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II' transl_table=11 from Sphingobium sp. HT1-2

 Score =  498 bits (1281), Expect = e-145
 Identities = 264/703 (37%), Positives = 415/703 (59%), Gaps = 18/703 (2%)

Query: 7   LADRLSAYLGPDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSL 66
           L +R+  Y       ++ RAY ++ Q H  Q+R SG+ Y +HP+ VA IL D ++D Q++
Sbjct: 7   LVERVKRYDPDADEAMINRAYVFSVQKHGSQKRASGDPYFSHPIEVAGILTDFYLDDQTI 66

Query: 67  MAAMLHDVIEDTGIAKEALSAQFGETVAELVDGVSKLTQMNFETKAEAQAENFQKMAMAM 126
           + A+LHD IEDT +  + +   FG+ VA +VDGV+KL+++   ++ E  AEN +K  +AM
Sbjct: 67  VTALLHDTIEDTLVTYDEIEEAFGKDVARMVDGVTKLSKIEAMSENERAAENLRKFLLAM 126

Query: 127 ARDIRVILVKLADRLHNMRTLEVLSGE-KRRRIAKETLEIYAPIANRLGMHAIRIEFEDL 185
           + DIRV+LVKLADRLHNMRTL  +  E KRRRIAKET++IYAP+A R+GM+    E + L
Sbjct: 127 SDDIRVLLVKLADRLHNMRTLHFIKNEQKRRRIAKETMDIYAPLAERIGMYDFMREMQLL 186

Query: 186 GFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSHCLAIDEIEGEVSGRQKHIYGIYK 245
            F+ + P     I + +++ +    + V++I   L   L    +   VSGR+KH Y I+K
Sbjct: 187 SFRVLEPEAYDSITKRLEQLKEGGHDKVDRIGAELQLLLGGHNLSVTVSGREKHPYSIWK 246

Query: 246 KMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQS 305
           KM+ +  +F ++ DV AFR+I +  + CYR LG +H  +K +PGRFKDYI+ PK NGY+S
Sbjct: 247 KMQERHISFEQLTDVMAFRVITETTEDCYRALGVIHQTFKMVPGRFKDYISTPKRNGYRS 306

Query: 306 LHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPKGTHARARQWVKGVLE 365
           LHTT+       IE+QIR+R+M   A  G+AAHW YK  GD   +        W++ ++E
Sbjct: 307 LHTTVIHQENARIEVQIRSRDMHNDAELGLAAHWAYKQKGDATDQNA-----AWLRDLVE 361

Query: 366 MQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVHTDVGNSCIAC 425
           + +++ ++ E +E  ++ ++ D ++ F+PKG + +LPKGST VDFAYAVHT +GN  +  
Sbjct: 362 ILEQSQDADELLEHTRMAMYQDRIFAFSPKGELHQLPKGSTPVDFAYAVHTSLGNQTVGA 421

Query: 426 RINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESIS 485
           ++N R+ PL   L++G  VEI+ + G  P P WL+F +TGKAR  IR  ++ ++R E ++
Sbjct: 422 KVNGRVVPLRTSLENGDQVEILKSAGQEPQPGWLSFAITGKARAAIRRFIRQKQRGEEVA 481

Query: 486 LGERLLNKVLNGFDSAL-DKIPTERVQAMLHEYRQETIEDLLEDIGLGNRMAYVVARRLL 544
           LGE+L  +++  F   L  ++  + + A L   + E    L+  I     +   V   L+
Sbjct: 482 LGEKLYEEIIGRFSPELASELGDKALNAALKRLKLEDRASLMVAIATHRLLDSEVMEALI 541

Query: 545 ---GEGEQL----PSPEGPLAIRG-TEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLD 596
                G++L    P    P++IRG T G+    ++CC P+PGD IVG    G+ + VH  
Sbjct: 542 PGSTSGQELEEAHPRQHAPVSIRGLTPGIAYKLSECCHPVPGDRIVGIRRTGEPIEVHTI 601

Query: 597 NCRNITEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAADGNIEKI 656
           +CR +       +  + LSW     G     L+V +++Q G +A +A+   A   NI  +
Sbjct: 602 DCRTLE--AGQDDDWVDLSWDSKSKGG-TARLQVIVKNQPGALAAVANVFGATKANILNL 658

Query: 657 SMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITRM 699
            +  R+G      + + V D  HL+R++  LRAL  V++  R+
Sbjct: 659 QLVNREGPFHTDIIDLEVADAQHLSRIVSALRALDTVVQADRV 701