Pairwise Alignments

Query, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 770 a.a., GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  348 bits (894), Expect = e-100
 Identities = 228/747 (30%), Positives = 360/747 (48%), Gaps = 73/747 (9%)

Query: 17  PDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSLMAAMLHDVIE 76
           P Q N + RA  +AE     ++  +GE  + H  AVA +L D+        AA L    +
Sbjct: 34  PKQANALARARAFAEPLLGSEQLDTGENTLAHADAVAGVLHDIGGSEAMQAAAYLVYACQ 93

Query: 77  DTGIAKEALSAQFGETVAELVDGVSKLTQMNFETK------------------------- 111
                +E ++  FG+  A L    +KL Q+  + +                         
Sbjct: 94  HLNRPQEVIAKAFGDNFAALALETTKLVQLQRQARIKSAEVLAKKEEERLAAQEQALPVT 153

Query: 112 ----------AEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKE 161
                     A +Q EN +KM +A +RD+RV++++LA RL  +R      GE    +A E
Sbjct: 154 TPGKTPVSELAASQTENVRKMLLAFSRDLRVVMLRLASRLQTLRYFAASKGEPGDALASE 213

Query: 162 TLEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLS 221
           +L ++AP+ANRLG+  I+ E EDL F+ + P    ++ + +   R  R+  V ++ + L 
Sbjct: 214 SLHVFAPLANRLGIWQIKWEMEDLAFRFLEPQTYKQVARLLDEKRTEREAHVEQVRQQLE 273

Query: 222 HCLAIDEIEGEVSGRQKHIYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVH 281
             L    +   V GR KHIY I KKMRGK   F+++ D+ A R+IV   D CY  L  VH
Sbjct: 274 SELLRQGVAASVQGRPKHIYSIVKKMRGKSLDFDQVFDIRALRVIVPDRDDCYTALAHVH 333

Query: 282 NLYKPLPGRFKDYIAIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLY 341
             Y P+   F DYIA PK NGYQSLHT +    G   EIQIRT+ M + A +G+AAHW Y
Sbjct: 334 AHYLPVADEFDDYIAKPKPNGYQSLHTVVRDEQGRAFEIQIRTQAMHDHAEHGVAAHWAY 393

Query: 342 KSSGDEQPKGTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMEL 401
           K +G +   G  A +    K  +  Q  A      +      LF D +YV TP   I+EL
Sbjct: 394 KEAGAKGYAGVSASSEYDAKIAVLRQLLAWE--RDLSGTAQGLFDDRIYVLTPDAAIVEL 451

Query: 402 PKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLN- 460
           P+G+TAVDFAY+VHTD+G+ C   R++  +  L+ PLQ+G TVEI +A    P+  WLN 
Sbjct: 452 PQGATAVDFAYSVHTDLGHRCRGARVDGAMVTLNTPLQNGQTVEITAAKEGGPSRDWLNA 511

Query: 461 ---FVVTGKARTHIRHALKLQRRSESISLGERLLNKVLNGFDSALDKIPTERVQAMLHEY 517
              ++V+ +A++ +R     Q   E+++ G   + K+L        K     V   L   
Sbjct: 512 ELGYLVSHRAKSKVRAWFNAQAMEETVARGREAVEKLLQREGKTALKFDDLAVSMGL--- 568

Query: 518 RQETIEDLLEDIGLGNRMAYVVARRLLGEGEQLPS---------------PEGPLAIRGT 562
              + ++L E +G        +   L     + PS               P G + + G 
Sbjct: 569 --ASAQELFEQVGKDELSLRAIETHLRPPEPEAPSEIPVWLKKPRKSSSQPSGGVLVVGV 626

Query: 563 EGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRNITEI-RHNPEKCIQLSW----A 617
           + L+   AKCC P P D I G ++ GKG+ +H  +C +   + R NP++ I++ W    A
Sbjct: 627 DSLMTQLAKCCKPAPPDEIGGFVTRGKGVSIHRADCSDFAHLQRKNPDRVIEVQWSGQGA 686

Query: 618 KDVTGE---FNVELRVELEHQRGLIALLASSVNAADGNIEKI-SMDERDGRISVVQLVVS 673
            D  G    + V++ +E + ++GL+  ++        N+  + +   RD  ++ +   + 
Sbjct: 687 PDRDGRAAVYPVDVAIEAQDRQGLLRDISDVFAREKMNVIGVQTQSVRD--VAWMTFTIE 744

Query: 674 VHDRVHLARVIKKLRALTGVIRITRMR 700
           V D   ++R +  +  + GV R+ R +
Sbjct: 745 VSDARQVSRAMSVVGDVPGV-RVVRRK 770