Pairwise Alignments

Query, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 700 a.a., bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase from Dickeya dianthicola ME23

 Score =  757 bits (1955), Expect = 0.0
 Identities = 371/691 (53%), Positives = 508/691 (73%), Gaps = 3/691 (0%)

Query: 11  LSAYLGPDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSLMAAM 70
           +  YL  DQ+  +++AY  A  AH+GQ R SGE Y+THP+AVA ILA+M +D+++LMAA+
Sbjct: 11  IQRYLPEDQIKRLKQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMRLDYETLMAAL 70

Query: 71  LHDVIEDTGIAKEALSAQFGETVAELVDGVSKLTQMNFETKAEAQAENFQKMAMAMARDI 130
           LHDVIEDT    + +   FG++VAELV+GVSKL ++ F  K EAQAENF+KM MAM +DI
Sbjct: 71  LHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFRKMIMAMVQDI 130

Query: 131 RVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHAIRIEFEDLGFKAM 190
           RVIL+KLADR HNMRTL  L  +KRRRIA+ETLEIY+P+A+RLG+H ++ E E+LGF+A+
Sbjct: 131 RVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEAL 190

Query: 191 HPMRSARIYQAVKRARGNRKEIVNKIEESLSHCLAIDEIEGEVSGRQKHIYGIYKKMRGK 250
           +P R   I + VK ARGNRKE++ KI   +   L    I   VSGR+KH+Y IY KM  K
Sbjct: 191 YPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLKEAGISCRVSGREKHLYSIYCKMHLK 250

Query: 251 RRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL 310
            + F+ IMD+YAFR+IV +VDTCYRVLG VH+LYKP PGR KDYIAIPKANGYQSLHT+L
Sbjct: 251 EQRFHSIMDIYAFRVIVREVDTCYRVLGQVHSLYKPRPGRVKDYIAIPKANGYQSLHTSL 310

Query: 311 FGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPKGTHARARQWVKGVLEMQQRA 370
            G HGVP+E+QIRT +M++MA  G+AAHW YK  G+        RA++W++ +LE+QQ A
Sbjct: 311 IGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYK-EGESSSTTAQVRAQRWMQSLLELQQSA 369

Query: 371 GNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVHTDVGNSCIACRINRR 430
           G+S EFIESVK DLFPDE+YVFTP+GRI+ELP G+T VDFAYAVHTD+G++C+  R++R+
Sbjct: 370 GSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQ 429

Query: 431 LAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESISLGERL 490
             PLS+ L SG T+EI++APGARPN AWLNFVV+ KAR  IR  LK  +R +S+SLG RL
Sbjct: 430 PYPLSQALSSGQTIEIITAPGARPNAAWLNFVVSSKARAKIRQMLKNLKRDDSVSLGRRL 489

Query: 491 LNKVLNGFDSALDKIPTERVQAMLHEYRQETIEDLLEDIGLGNRMAYVVARRLLGEGEQL 550
           LN  L G    L  IP + +Q  L   +  +++DLL +IGLGN M+ VVAR LL E  + 
Sbjct: 490 LNHAL-GSGRKLPDIPEQNIQRELERMKLASLDDLLAEIGLGNAMSVVVARNLLEERTET 548

Query: 551 PSPE-GPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRNITEIRHNPE 609
            +     L I+G +G+++++AKCC PIPGDPI+ H+S GKG+V+H ++CRNI   +  PE
Sbjct: 549 GATGIRKLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPE 608

Query: 610 KCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDGRISVVQ 669
           K + + W +    EF  E++V++ + +G +A L ++++A++ NI+ I+ +ERDGR+    
Sbjct: 609 KFMAVEWDEVTEQEFMTEIKVDMFNHQGALANLTAAISASNSNIQSINTEERDGRVYSAF 668

Query: 670 LVVSVHDRVHLARVIKKLRALTGVIRITRMR 700
           + ++  DR+HLA +++K+R +  VI++ R R
Sbjct: 669 IRLTTRDRIHLANIMRKIRVMPDVIKVNRNR 699