Pairwise Alignments

Query, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 752 a.a., bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase from Bacteroides stercoris CC31F

 Score =  400 bits (1029), Expect = e-116
 Identities = 243/742 (32%), Positives = 406/742 (54%), Gaps = 60/742 (8%)

Query: 6   ALADRLSAYLGPD---QVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILA-DMHM 61
           A  + L+ YL      +V ++ +A+ +A QAH G +RRSGE Y+ HP+AVA I+  ++ +
Sbjct: 21  AFQELLNDYLATKHRKRVEIITKAFNFANQAHKGIKRRSGEPYIMHPIAVAKIVCNEIGL 80

Query: 62  DHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDGVSKLTQMNFETKAEAQAENFQK 121
              S+ AA+LHDV+EDT    E +   FG  +A++VDG++K++   F  +A AQAENF+K
Sbjct: 81  GSTSICAALLHDVVEDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKK 140

Query: 122 MAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHAIRIE 181
           + + M+ DIRVIL+K+ADRLHNMRTL  +   K+ +IA ETL IYAP+ANRLG++ I+ E
Sbjct: 141 LLLTMSDDIRVILIKIADRLHNMRTLGSMLPNKQFKIAGETLYIYAPLANRLGLYKIKTE 200

Query: 182 FEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSHCLAIDEIEGEVSGRQKHIY 241
            E+L F+  HP     I + ++     R ++  +    +   L    ++  +  R K IY
Sbjct: 201 LENLSFRYEHPEEYREIEKKLEATAVERDKVFKEFTAPIRAQLDKMGLKYRILARIKSIY 260

Query: 242 GIYKKMRGKRRAFNEIMDVYAFRIIV------DKVDTCYRVLGAVHNLYKPLPGRFKDYI 295
            I+ KM+ K   F EI D+ A RII       ++++ C+ +  ++  +YKP P R +D++
Sbjct: 261 SIWNKMQTKHVPFEEIYDLLAVRIIFEPRNMEEELNDCFNIYVSISKIYKPHPDRLRDWV 320

Query: 296 AIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPKGTHAR 355
           + PKANGYQ+LH TL G +G  IE+QIR+  M ++A  G AAHW YK  G  + +G   +
Sbjct: 321 SHPKANGYQALHVTLMGNNGQWIEVQIRSERMNDVAEQGFAAHWKYKEGGGSEDEGELDK 380

Query: 356 ARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVH 415
             + +K +L+  Q   ++++F++++K++LF  E++VFTPKG I  +P+ STA+DFA+++H
Sbjct: 381 WLRTIKEILDDPQ--PDAIDFLDTIKLNLFASEIFVFTPKGEIKTMPQNSTALDFAFSLH 438

Query: 416 TDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHAL 475
           TD+G+ CI  ++N +L PLS  LQSG  VE++++   R  P W  +  T +AR  I   L
Sbjct: 439 TDIGSHCIGAKVNHKLVPLSHKLQSGDQVEVLTSKSQRVQPEWEAYATTARARAKIASIL 498

Query: 476 KL-----QRRSESISLGERLLNKVLNGFDSALDKIPTERVQAMLHEYRQETIEDLLEDIG 530
           +      Q+  E+I L + L N+ +   DSA+DK+        LH +   T ++L   +G
Sbjct: 499 RKEAKAHQKEGEAI-LADFLKNEDIRMDDSAIDKL------TRLHNF--HTRDELFVAVG 549

Query: 531 LGNRMAYVVARRLLGE--------------------------GEQLPSPE--GPLAIRGT 562
               +     R    E                           E++P  +      ++ T
Sbjct: 550 SKKLVLGDADRNAFKEKQSTNWKKFLTFSFGNKDNKDTKEQSEEKVPQEKINTKQILKLT 609

Query: 563 EGLVLS---YAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRNITEIRHN-PEKCIQLSWAK 618
           E  +      A CC PIPGD ++G++     +++H   C     ++ +   + I   W  
Sbjct: 610 EETIQKNYIMADCCHPIPGDDVLGYIDEQNRIIIHKRQCPVAARLKSSYGNRIIATEWDT 669

Query: 619 DVTGEFNVELRVELEHQRGLIALLASSVN-AADGNIEKISMDERDGRISVVQLVVSVHDR 677
                F V + ++     GL+  +   ++   + NI K++++  DG I   ++ + VHD 
Sbjct: 670 HKELSFLVTIYLKGIDSMGLLNEVTQVISRQLNVNIRKLTIETTDG-IFEGKIQLYVHDV 728

Query: 678 VHLARVIKKLRALTGVIRITRM 699
             +  +   L+ +  + ++TR+
Sbjct: 729 DDVRSICDNLKQIQNIKQVTRI 750