Pairwise Alignments

Query, 240 a.a., ribonuclease PH from Pseudomonas simiae WCS417

Subject, 701 a.a., polynucleotide phosphorylase/polyadenylase from Pseudomonas simiae WCS417

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 39/242 (16%)

Query: 3   RPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTK--VICTVSVENGVPRF--LKGQGQG 58
           R  GR    +R + I         GS L   G+T+  V+ T+           L+G+ + 
Sbjct: 316 RIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKD 375

Query: 59  WLTAEYGMLPRATGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDVTLYVDCD 118
                Y   P + GE  +     G  G R +   RL  RS+ A L  + +   T+ V  +
Sbjct: 376 PFMLHYNFPPFSVGECGRM----GGAGRREIGHGRLARRSIAAMLPAADVFPYTIRVVSE 431

Query: 119 VIQADGGTRTASITGAMVALVDALKVIKKRGGLKAGDPLKQMIAAVSVGMY-QGEPVLDL 177
           + +++G +  AS+ GA +AL+D            AG P+K  +A +++G+  +GE    L
Sbjct: 432 ITESNGSSSMASVCGASLALMD------------AGVPMKAPVAGIAMGLVKEGEKFAIL 479

Query: 178 -DYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNA 236
            D L D     D++          +V GTA+G      D+        KG+TE  E+   
Sbjct: 480 TDILGDEDHLGDMD---------FKVAGTAKGVTALQMDIKI------KGITE--EIMEI 522

Query: 237 AL 238
           AL
Sbjct: 523 AL 524