Pairwise Alignments

Query, 530 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  484 bits (1245), Expect = e-141
 Identities = 248/530 (46%), Positives = 341/530 (64%), Gaps = 4/530 (0%)

Query: 2   RLAALPLLLAPLFIA--PLASAASNLSVCTEASPEGFDVVQYNSLTTTNASADVLMNRLV 59
           R+A  PLLLA   +A  PLA AAS L  C+EASP GFD  QY S T  +ASA+ + NRL 
Sbjct: 3   RIALKPLLLAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLT 62

Query: 60  DYDAASGKLVPSLADSWEVSPDGLTYTFKLHPDVKFHRTEYFTPSRTLTAEDVRFSFERM 119
            +     ++ P LA SW++S DGLTYTF L   VKFH T++F+P+R   A+DV F+F R+
Sbjct: 63  QFKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRL 122

Query: 120 LDPANPWHKIAQSGFPHAQSLQLPTLVKKIDALDPLTVRFTLDHADSTFLAALSMGFASI 179
           LD  +P+ +   S  P+   + L T +K +D LD  TVRF L++ D++F+  L+M FAS+
Sbjct: 123 LDAQSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASV 182

Query: 180 YPAEYAEKLLKAGTPEKLNSQPIGTGPFIFSRFQKDAVVRYKANPNYFAGKP-PVDNLIF 238
             AEYA +LLK G  E++N +P+GTGPF+F R+QKD+ +RY AN  Y+  +   +DNL+F
Sbjct: 183 QSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVF 242

Query: 239 AITPDANVRLQKLHRDECQIALSPKPLDVGEAEKDPALKVEKTAAFMTAFLAINSQHPPL 298
           AITPDA  RLQKL   ECQ++  P+P D+   ++DP L V + A F   FLA N  HPPL
Sbjct: 243 AITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHPPL 302

Query: 299 DKPEVRQAINLAFDKGSYLKAVFEGTAEAANGPYPPNTWSYAKDLPGYPQDLAKAKALLD 358
           D+ +VRQA+++A DK + +KAV++   + A    PP  WSY   +   P D  KAKALL 
Sbjct: 303 DQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAKALLK 362

Query: 359 RAGLKDGFKTTIWTRPTGSLLNPNPNLGAQLLQADLAKVGIQAEIRVIEWGELIRRAKAG 418
            AG+  G    +W        NPN  + AQ++Q D  KVGI+A I   EWGE I+RAK G
Sbjct: 363 EAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAKNG 422

Query: 419 EHDLLFMGWAGDNGDPDNFLTPQFSCAAVKSGTNFARYCDPALDKLISAGKTTSEQGVRS 478
           EHD +  GW GDNGDPDN+L   +SCAAVK G+N+A++C+PA DKL+   K ++++  R 
Sbjct: 423 EHDAMIYGWTGDNGDPDNWLGVLYSCAAVK-GSNYAKWCNPAYDKLVQQAKVSNDREQRI 481

Query: 479 KLYQQAQAQIQQQALWLPLAHPTAFALARKNVEGYQVSPFGRQDFSKVSV 528
           K YQQAQ  +++Q    P+A+ T F   RK V+ +++SPFG   F  VS+
Sbjct: 482 KWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFGLTPFYGVSL 531