Pairwise Alignments

Query, 530 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

 Score =  831 bits (2147), Expect = 0.0
 Identities = 414/528 (78%), Positives = 458/528 (86%), Gaps = 1/528 (0%)

Query: 1   MRLAALPLLLAPLFIAPLASAASNLSVCTEASPEGFDVVQYNSLTTTNASADVLMNRLVD 60
           MR+AAL LL   LF A  A AA  LSVC+EASPEGFDVVQYNSLTTTNA+ADVLMNRLV+
Sbjct: 1   MRVAALSLLFTTLFAAGAAQAAP-LSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLVE 59

Query: 61  YDAASGKLVPSLADSWEVSPDGLTYTFKLHPDVKFHRTEYFTPSRTLTAEDVRFSFERML 120
           +DAA GK+VPSLA SW VS DGL Y F L  DVKFH T YF PSR L A+DV FSF+RML
Sbjct: 60  FDAAQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRML 119

Query: 121 DPANPWHKIAQSGFPHAQSLQLPTLVKKIDALDPLTVRFTLDHADSTFLAALSMGFASIY 180
            PA+ WHK A  G+PHAQSLQL +L+K I+A  P TVRFTL H D+TFLA LSMGFASIY
Sbjct: 120 YPAHAWHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASIY 179

Query: 181 PAEYAEKLLKAGTPEKLNSQPIGTGPFIFSRFQKDAVVRYKANPNYFAGKPPVDNLIFAI 240
            AEYA+KLLKAGTPEKLN+QPIGTGPF+F RFQKDAVVRY+ANP+YFAGKP VD LIFAI
Sbjct: 180 SAEYADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPAVDPLIFAI 239

Query: 241 TPDANVRLQKLHRDECQIALSPKPLDVGEAEKDPALKVEKTAAFMTAFLAINSQHPPLDK 300
           T DANVRLQKL R ECQ+ALSPKPLD+ EA +D  LKV  T AFMTAF+AINSQHPPLDK
Sbjct: 240 TTDANVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINSQHPPLDK 299

Query: 301 PEVRQAINLAFDKGSYLKAVFEGTAEAANGPYPPNTWSYAKDLPGYPQDLAKAKALLDRA 360
           PEVRQAINLAFD+ +YLKAVFE +A AANGPYPPNTWSYAKDLPGYP DL KAKALL +A
Sbjct: 300 PEVRQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKA 359

Query: 361 GLKDGFKTTIWTRPTGSLLNPNPNLGAQLLQADLAKVGIQAEIRVIEWGELIRRAKAGEH 420
           GL +GF TTIWTRP+GSLLNPNP+LGAQ+LQADLAK+GI+AEIRVIEWGELIRRAKAGEH
Sbjct: 360 GLAEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAGEH 419

Query: 421 DLLFMGWAGDNGDPDNFLTPQFSCAAVKSGTNFARYCDPALDKLISAGKTTSEQGVRSKL 480
           DLLFMGWAGDNGDPDNFL+PQFSCAAV+SGTNFAR+CD  LD+LISAG+TT++Q VRS+L
Sbjct: 420 DLLFMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRSRL 479

Query: 481 YQQAQAQIQQQALWLPLAHPTAFALARKNVEGYQVSPFGRQDFSKVSV 528
           YQQAQ  IQQQALW+PLAHPTA  L R+ VEGYQVSPFGR DFSKV+V
Sbjct: 480 YQQAQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTV 527