Pairwise Alignments

Query, 530 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 535 a.a., dipeptide ABC transporter substrate-binding protein DppA from Escherichia coli ECRC62

 Score =  457 bits (1175), Expect = e-133
 Identities = 223/508 (43%), Positives = 317/508 (62%)

Query: 22  ASNLSVCTEASPEGFDVVQYNSLTTTNASADVLMNRLVDYDAASGKLVPSLADSWEVSPD 81
           A  L  C+E SPEGF+   + S TT +AS+  L NRLV++   + +++P LA+ WEVS D
Sbjct: 28  AKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSED 87

Query: 82  GLTYTFKLHPDVKFHRTEYFTPSRTLTAEDVRFSFERMLDPANPWHKIAQSGFPHAQSLQ 141
           G TYTF L   VK+H  + F P+R L A+DV FSF+R  +  NP+HK++   + + + + 
Sbjct: 88  GKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMG 147

Query: 142 LPTLVKKIDALDPLTVRFTLDHADSTFLAALSMGFASIYPAEYAEKLLKAGTPEKLNSQP 201
           LP L+ ++  +D  TV+F L   ++ FLA L+M FASI   EYA+ ++KAGTPEKL+  P
Sbjct: 148 LPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNP 207

Query: 202 IGTGPFIFSRFQKDAVVRYKANPNYFAGKPPVDNLIFAITPDANVRLQKLHRDECQIALS 261
           IGTGPF   ++QKD+ +RYKA   Y+  KP +D L+F+ITPDA+VR  KL ++ECQ+   
Sbjct: 208 IGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPY 267

Query: 262 PKPLDVGEAEKDPALKVEKTAAFMTAFLAINSQHPPLDKPEVRQAINLAFDKGSYLKAVF 321
           P P D+   ++D ++ + +       +L+ N Q  PLD  +VRQA+  A +K + +KAV+
Sbjct: 268 PNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVY 327

Query: 322 EGTAEAANGPYPPNTWSYAKDLPGYPQDLAKAKALLDRAGLKDGFKTTIWTRPTGSLLNP 381
           +G   +A    PP  W Y  D+  Y  D  KAKALL  AGL+ GF   +W  P     NP
Sbjct: 328 QGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWAMPVQRPYNP 387

Query: 382 NPNLGAQLLQADLAKVGIQAEIRVIEWGELIRRAKAGEHDLLFMGWAGDNGDPDNFLTPQ 441
           N    A+++QAD AKVG+QA+I   EWGE ++RAK GEH  + MGW GDNGDPDNF    
Sbjct: 388 NARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATL 447

Query: 442 FSCAAVKSGTNFARYCDPALDKLISAGKTTSEQGVRSKLYQQAQAQIQQQALWLPLAHPT 501
           FSCAA + G+N++++C    + LI   + T +   R +LY+QAQ  +  QA  L +AH T
Sbjct: 448 FSCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHST 507

Query: 502 AFALARKNVEGYQVSPFGRQDFSKVSVK 529
            F   RK V+GY V P G+  F  VS++
Sbjct: 508 VFEPVRKEVKGYVVDPLGKHHFENVSIE 535