Pairwise Alignments

Query, 289 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 17/278 (6%)

Query: 12  IWAGNTVVNKLAVGALFPAEIGFYRWLLAA--LLFTPFMIKPVIANWALIRPNLGKVFIL 69
           IW  + +  ++    +      F+R  +AA  LL    M++    +W   +     V +L
Sbjct: 15  IWGASFLFMRIIAPEIGTVPTAFFRVSIAAAGLLVILAMMR---VSWDF-QGKFRTVLLL 70

Query: 70  GVLGMAVYQSLAYYAASLTTATNMGIILSLMPLMALTAAIISLGQRLTYGALTGAVLSFA 129
           GV+   +  ++   AA    A    I  +  PLM +    +   +RLT   + G  L   
Sbjct: 71  GVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPSKIAGVCLGLF 130

Query: 130 GVVVVVSAGSLDALLQHGVNLGDGMMLVATLAYAVYSTLLKKW---QLRLPPLVLLYLQV 186
           GV V+  AG +   L+  +  G    L+AT  Y     L ++W   +  L   +     +
Sbjct: 131 GVGVLTRAGPVAFDLE--LLTGALACLLATTCYGFAGFLARRWLDQRGGLDSRLSALGSM 188

Query: 187 LVAVVVLFPLFLFSA-----KAGLGWANIPLVLYACLLASMLAPLAWMHSVKTLGPSRTT 241
           L A + L P F +SA      +  GW     +L   L+ +  A + +   + ++GP ++ 
Sbjct: 189 LGATLFLLPFFAYSAISQPPASWGGWQVWGSLLGLGLVCTAFAYILYFRLLTSIGPVKSM 248

Query: 242 LFFNLLPLITALIAAVVLKEELALYHLVGGLLTLGGVI 279
               ++P    L  A++L E L++ H+ GG+L +GG +
Sbjct: 249 TVTFMIPPFGVLWGALLLGEPLSMAHVYGGVL-IGGAL 285