Pairwise Alignments

Query, 289 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  159 bits (403), Expect = 6e-44
 Identities = 88/289 (30%), Positives = 154/289 (53%), Gaps = 5/289 (1%)

Query: 3   YAYPLLAIFIWAGNTVVNKLAVGALFPAEIGFYRWLLAALLFTPFMIKPVIANWALIRPN 62
           Y   ++A   W GNTV  KLAVG + P    F RW+LA  +     +  +I +W +++  
Sbjct: 13  YLALIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLAVAIIFAISVPQLIKDWPVVKQR 72

Query: 63  LGKVFILGVLGMAVYQSLAYYAASLTTATNMGIILSLMPLMALTAAIISLGQRLTYGALT 122
           L   F+LG +G   +    Y A   T+A N  +I + +P++      +    R+ +G + 
Sbjct: 73  LPYFFVLGSVGYTAFNVFLYTALQHTSAINAAVIQAGIPMVIFVLNFVLFRTRVLFGQIA 132

Query: 123 GAVLSFAGVVVVVSAGSLDALLQHGVNLGDGMMLVATLAYAVYSTLLKKWQLRLPPLVLL 182
           G  L+ +GV ++ S G   +LLQ  +N+GD +ML+A L YA+Y+ +L +W+  +    L+
Sbjct: 133 GFCLTISGVALLASHGDPLSLLQLEMNVGDAVMLLAVLVYAIYTVIL-RWKPAVDWRTLM 191

Query: 183 YLQVLVAVVVLFPLFLFS-AKAGLGWANIP---LVLYACLLASMLAPLAWMHSVKTLGPS 238
            +    A++   PL  F  ++  L W +     LV+YA + AS++A + ++  V+ +G +
Sbjct: 192 AIPAFFALLTSVPLVFFEMSRESLIWPDQKGWMLVVYAGIFASLIAQILYIKGVEQIGAN 251

Query: 239 RTTLFFNLLPLITALIAAVVLKEELALYHLVGGLLTLGGVILSERWTTP 287
           R  LF NL+P+   L++  VL E L  Y +    + L G+ ++ER  +P
Sbjct: 252 RAGLFINLVPVFGTLLSVFVLSETLHTYQIAALFMALAGIAVAERKKSP 300