Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 109/454 (24%), Positives = 186/454 (40%), Gaps = 27/454 (5%)

Query: 7   ARTELWAILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIF--- 63
           A   LW +  L   L    L+++L  L+ TL    +  + L  G L A S  F  +F   
Sbjct: 26  AARPLWKVFLLF--LAPMLLSNILQSLSGTLNNIYVG-QMLGVGALAAVSSFFPVMFFFI 82

Query: 64  --CIGVIAAVGTLVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLK-PLLLLFG 120
              IG+ A    L+    GA D   A  +    L +  L  L   +       P+L   G
Sbjct: 83  AFIIGLGAGASVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASLG 142

Query: 121 QTETNVHSAGQFLTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHAL 180
                +  + ++  I+  A+PG   F+        +G     ++  +   +   ++  AL
Sbjct: 143 TPPDVLADSTRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPAL 202

Query: 181 IEGMFGLPKLGLMGIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGL--LRLNTQYLR 238
           I G  GLP+LG+   G   +V++  +A   + +  R R     P +  +  LR+  Q L+
Sbjct: 203 IRGWGGLPQLGVAS-GAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQLLK 261

Query: 239 ELWRLGLPIGGTYAVEVGLFAFAALCM-GTMGSTQLAAHQIALQIVSVAFMVPAGMSYAV 297
            + ++G+P  G   + V L     L M  + GS+  AA+    Q+  VA++    +S A+
Sbjct: 262 AVLKIGVPT-GVQMIVVALAEVVLLSMVNSYGSSATAAYGAVNQV--VAYVQFPAISIAI 318

Query: 298 TMRI--GQHYGAGQLLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFH 355
           T  I   Q  GAG+  +     +  +     +  G   + +L+S  L+   I  ++P   
Sbjct: 319 TASILGAQAIGAGRANRLGAIAKTALLMNVVLTGGLVVLGYLFSRHLMAFFIT-SEP--- 374

Query: 356 DVIVLAVSLLAVAAWFELFDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAF 415
            V+ +A +LL +  W  +  G+ +   G +R         LI   C   +  P A+ M+ 
Sbjct: 375 -VLEIAQTLLHIMLWSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSH 433

Query: 416 TLG----WGPTGVWWGLALGLACAAVSLTWAFEA 445
            LG    W    V +G  L L  A   L W  +A
Sbjct: 434 RLGLDGIWIAYPVTFGAMLLLQTAYYQLVWRKKA 467