Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 450 a.a., Na+-driven multidrug efflux pump from Variovorax sp. SCN45

 Score =  164 bits (416), Expect = 4e-45
 Identities = 134/442 (30%), Positives = 205/442 (46%), Gaps = 16/442 (3%)

Query: 14  ILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFCIGVIAAVGT 73
           I R +G ++  QLA M   +TDT++  R S  ALA   +GAA +  V +  +GV+ A+  
Sbjct: 11  IARHAGTVLVGQLAVMAFGVTDTIIAGRYSEGALAALSVGAAIFVSVYVSLMGVLQALLP 70

Query: 74  LVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLKPLLLLFGQTETNVHS-AGQF 132
           + A  HGAG      R  +  L+LA  +A+  G+        +L   Q    +      +
Sbjct: 71  VWAELHGAGRSNEVGRSVRQSLYLA-AIAIVVGMAALLAPAAVLRLTQVPPEMRGDVEMY 129

Query: 133 LTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHALIEGMFGLPKLGL 192
           L +L FAL   L F        ++GK Q V  + LG       L+     G  GLP +GL
Sbjct: 130 LRVLAFALAPALLFRLFSTLNQSLGKPQLVTWLQLGSLFVKLPLSIWFTFGGAGLPAMGL 189

Query: 193 MGIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGLLRLNTQYLRELWRLGLPIGGTYA 252
           +G G  T  V   M    +W +  +  Y  Y L   L + +   +R   +LG+P G    
Sbjct: 190 VGCGWATLCVNWAMLACAIWLLRSSPFYRGYRLWERLEKPDWHQIRLFAKLGVPGGLAVL 249

Query: 253 VEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRIGQHYGAGQLLQ 312
           VEV  F   AL +  +G+   AAHQIA  +++VA+MVP  +S A + R+    GAG  ++
Sbjct: 250 VEVTSFTLMALFIARLGTAAAAAHQIAANLMAVAYMVPLSLSIATSARVSFWLGAGDAMR 309

Query: 313 ARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFHDVIVLAVSLLAVAAWFE 372
           AR A R+G        L F+  L  +  PL  +  D  +PA   V+ LA SL+   A + 
Sbjct: 310 ARHACRLGFEQTVLCALLFSTALVTFRHPLANVYSD--NPA---VVALAASLMLAVAAYH 364

Query: 373 LFDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAFTLGWGPTGVWWGLALGL 432
           L D +QT+ +  +R  +      +I     W +G   ++L+A+  G GP   W  +   L
Sbjct: 365 LADAMQTLCVFLLRCYRVTLAPLVIYCTMLWGLGLGGSYLLAYH-GLGP---WTAMRSPL 420

Query: 433 A-----CAAVSLTWAFEAKMKR 449
           A       A++LT  F   + R
Sbjct: 421 AFWMMSAGALALTAMFFISLLR 442