Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 105/429 (24%), Positives = 180/429 (41%), Gaps = 38/429 (8%)

Query: 14  ILRLSGPLIASQLAHMLMVLTDTLMMAR-LSPEALAGGGLGAASYSFVSIFCIGVIAAVG 72
           +L  + P +AS +   L    + + + R L P+ALA      A+ + +      V+   G
Sbjct: 20  LLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAA----TANANIIMFLMFSVVFGFG 75

Query: 73  ----TLVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLKPLLL-LFGQTETNVH 127
                ++A   GA D++ A R   + +   +L+A+   +  W   P LL L         
Sbjct: 76  MASTVMIAQAVGARDMDAARRAFGSAVGFCFLLAMGVAVAGWFGGPALLHLLATPPEAFD 135

Query: 128 SAGQFLTILPFALPG-FLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHALIEGMFG 186
            A  +L ++  A+P   LS M + G     G A+  ++  +     + +LN  LI G+  
Sbjct: 136 MALTYLRVIFVAMPASLLSVMMMMGLRGT-GDARTPLIFMILSVAIDLVLNPVLILGLGP 194

Query: 187 LPKLGLMGIGLVTAVVANGMALALMWYIH-RNRTYAAYPLSTGLLRLNTQYLRELWRLGL 245
           +P +G+ G    TA       +AL+ Y + ++          G LR     +R L   GL
Sbjct: 195 IPAMGIGGSAAATAAAGFVSLIALVIYTYAKDLPLRLRGAELGYLRPAMDEMRVLSTKGL 254

Query: 246 PIGGTYAVEVGLFAFAALCM----GTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRI 301
           P+G    +++ + + + L M       G    AA+  A QI +   M    M  AV+   
Sbjct: 255 PMG----LQMIVMSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAMGAAVSAMA 310

Query: 302 GQHYGAGQLLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFHDVIVLA 361
            Q+ GAG+  +       GI +  A+      V+ ++ + L+ L + HN      VI  A
Sbjct: 311 AQNIGAGRWDRISRITGYGISYLLAITGAMVVVILIFHEALLALFLSHNQA----VIDAA 366

Query: 362 VSLLAVAAWFELFDGVQTIAMGCIRG--------LKDAKTTFLIGAGCYWL----IGAPS 409
            ++  +A+W  +  G   I  G +R         L    T F +  G Y+L    IGA +
Sbjct: 367 WNMQLLASWSFMLFGCTMILFGVMRANGVVVAPLLILVFTLFAVRLGFYYLAYPRIGADA 426

Query: 410 AWLMAFTLG 418
            WL +F +G
Sbjct: 427 LWL-SFPVG 434