Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 451 a.a., Na+ driven multidrug efflux pump from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 118/443 (26%), Positives = 183/443 (41%), Gaps = 43/443 (9%)

Query: 3   MQHPARTELWAILRLSGPLIASQLAHMLMVLTDTL----MMARLSPEALAG-GGLGAASY 57
           M +  +  LW +  +   L+   L+++L  L+ TL    +   L   ALA   G+    +
Sbjct: 1   MPNAPQGPLWRVYLVF--LVPMVLSNILQGLSGTLNGIFIGQMLGTHALAAVSGMFPIVF 58

Query: 58  SFVSIFCIGVIAAVGTLVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLL-LWNLKPLL 116
            F+S+  IG+ A    L+    GA +      +    L L  L+ L A +L +   +P L
Sbjct: 59  FFISLV-IGIGAGASVLIGQAWGAREPHKVKAIAGTALVLGALIGLVAAVLGVVFARPAL 117

Query: 117 LLFGQT----ETNVHSAGQFLTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVA 172
              G      +  V  A   L I+P  L   L    LRG +  +    P++ + L  A+ 
Sbjct: 118 QALGTPVDVLDDAVAYARVMLLIMPLLLVFILFTQLLRGVSDTVS---PLIALLLSTALG 174

Query: 173 NYLLNHALIEGMFGLPKLGLMG---IGLVTAVVANGMALALMWYIHRNRTYAAYPLS-TG 228
             LL  ALI+G  GLP+LG+      GLV+   A G    L W + R     A      G
Sbjct: 175 -LLLTPALIQGWLGLPRLGIQSAAYAGLVSYAAALGF---LAWRLGRKHHVLAVDRELIG 230

Query: 229 LLRLNTQYLRELWRLGLPIG-GTYAVEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAF 287
            LRL+   L ++ R+G+P G     + V      AL  G  GS   AA+    Q+V+   
Sbjct: 231 ALRLDRDILAKVMRIGIPTGLQMVVISVSELVILALVNG-HGSQATAAYGAVTQVVNYVQ 289

Query: 288 MVPAGMSYAVTMRIGQHYGAGQLLQARLAGRVGIGF-----GAAVMLGFAAVLWLYSDPL 342
                ++   ++   Q  GAG++ +     R G+       GA V+LG+A      S  L
Sbjct: 290 FPALSIAITASILAAQSIGAGRVDRLGAILRTGLWLNAVLTGALVLLGYA-----LSHKL 344

Query: 343 IGLLIDHNDPAFHDVIVLAVSLLAVAAWFELFDGVQTIAMGCIRGLKDAKTTFLIGAGCY 402
           +GL +        +V   A  LL +  W  L  G Q +  G +R          I   C 
Sbjct: 345 MGLFLTQ-----PEVRAQAEHLLHIMLWSILVFGFQAVVGGLMRASGVVMVPMAISVFCI 399

Query: 403 WLIGAPSAWLMAFTLGWGPTGVW 425
             I  P+A+++   +G    GVW
Sbjct: 400 LAIQLPAAYVLDAKMGL--PGVW 420