Pairwise Alignments

Query, 636 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 555 a.a., fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  258 bits (658), Expect = 6e-73
 Identities = 172/525 (32%), Positives = 283/525 (53%), Gaps = 30/525 (5%)

Query: 14  QRLLEDAELTLHAGHKAGLIGANGAGKSTLFALLLGELTPDSGDCLLPADWRIAHMRQE- 72
           + +L++  L+   G K G++G NGAGKSTL  ++ G      G+     D +I ++ QE 
Sbjct: 19  RHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEP 78

Query: 73  -------IDTLDRIAIDYVLDGDLRLRQVQHDLAEAEKAQD--GAAQARLHSELDSADGY 123
                  +      A+  V++   RL +V    A+ +   D   A Q RL   + + DG+
Sbjct: 79  QLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGH 138

Query: 124 TADARARKMLAGLGFTNEQMDRPVADFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLD 183
             + +  +    L   +   D  +A+ SGG R R+ L + L+   D+LLLDEPTNHLD +
Sbjct: 139 NLNVQLERAADALRLPD--WDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAE 196

Query: 184 AILWLEDFLKNYQGTLLLISHDRDFLDAVVDNIAHVEQKKITLYRGGYTAFERARAERLA 243
           ++ WLE FL +++GT++ I+HDR FLD V   I  +++ +   + G Y+++   + +RLA
Sbjct: 197 SVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLA 256

Query: 244 QQQQAYEKQQAQRAHMESYIARFKAQATKARQAQSRIKALERMEELSAAHV---DSPFDF 300
           Q+     ++ A+R  +E  +  +  Q TK RQ++ + + L R EEL++      +   + 
Sbjct: 257 QEA---SQEAARRKSIEKEL-EWVRQGTKGRQSKGKAR-LARFEELNSTEYQKRNETNEL 311

Query: 301 VFRESVKISSPLLDLSDARLGYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLSG 360
                 ++   +L++S+ R  YGD+ +++ +   +  GA +G++GPNGAGKSTL + +SG
Sbjct: 312 FIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISG 371

Query: 361 ELSPLAGRLTRGENTVVGYFAQHQLDSLDS------KASPLLHLQRLAPTEREQTLRDFL 414
           +  P +G +T GE   +    Q + DS+D+      + S  L + ++  TE     R ++
Sbjct: 372 QEQPDSGTITLGETVKLASVDQFR-DSMDNSKTVWEEVSGGLDIMKIGNTEMPS--RAYV 428

Query: 415 GGFDFRGARIDEPVLNFSGGEKARLALALIAWDRPNLLLLDEPTNHLDLEMRLALTMALQ 474
           G F+F+G    + V   SGGE+ RL LA +     N+LLLDEPTN LD+E   AL  AL 
Sbjct: 429 GRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALL 488

Query: 475 EFSGAVLVVSHDRHLLKSTTDNFLLVAD-GKVEEFDGDLDDYARW 518
           EF G  +V+SHDR  L     + L   D GKVE F+G+  +Y  +
Sbjct: 489 EFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEY 533



 Score =  107 bits (267), Expect = 1e-27
 Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 28/243 (11%)

Query: 1   MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSTLFALLLGELTPDSGDCLL 60
           ++ + +L    G + L++D   ++  G   G+IG NGAGKSTLF ++ G+  PDSG   L
Sbjct: 323 VLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITL 382

Query: 61  PADWRIAHMRQEIDTLDRIAIDYVLDGDLRLRQVQHDLAEAEKAQDGAAQARLHSELDSA 120
               ++A + Q  D++D     +                  E+   G         LD  
Sbjct: 383 GETVKLASVDQFRDSMDNSKTVW------------------EEVSGG---------LDIM 415

Query: 121 DGYTADARARKMLAGLGFTNEQMDRPVADFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL 180
                +  +R  +    F      + V + SGG R RL+LA+ L    ++LLLDEPTN L
Sbjct: 416 KIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDL 475

Query: 181 DLDAILWLEDFLKNYQGTLLLISHDRDFLDAVVDNIA-HVEQKKITLYRGGYTAFERARA 239
           D++ +  LE+ L  + G  ++ISHDR FLD +  +I  + ++ K+  + G +T +E  + 
Sbjct: 476 DIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKK 535

Query: 240 ERL 242
             L
Sbjct: 536 RTL 538