Pairwise Alignments

Query, 190 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 294 a.a., small-conductance mechanosensitive channel MscS from Erwinia tracheiphila SCR3

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 15/150 (10%)

Query: 20  VQILLILLAGYLAQRFVAKGLTRLGERYPFPPQLLMPLRGGLRWLIMGSALIFVLGRLGV 79
           V  + IL+ G +  R ++  L +L         ++  L   +R+ ++    I  LGR+GV
Sbjct: 32  VAAIAILIVGMIMARLISNTLNKLLVARHIDATVVDFLSALVRYGLIAFTFIAALGRIGV 91

Query: 80  SATVLWTALSGFVAVAAVAFFAMWSVLSNLLCAILIFTVGPFRLGDIVELVDTVDKPGVK 139
               +   L    A       A+   LSNL   +L+    PFR GD +++       GV 
Sbjct: 92  QTASVIAVLG---AAGLAVGLALQGSLSNLAAGVLLVMFRPFRTGDFIDI-------GVM 141

Query: 140 GRVVAINLLYTTLIEVAEAGTDSAMVQVPN 169
           G V ++ +  TTL       +D  +V VPN
Sbjct: 142 GTVTSVQIFSTTL-----KSSDGKIVVVPN 166