Pairwise Alignments

Query, 216 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  194 bits (494), Expect = 8e-55
 Identities = 94/203 (46%), Positives = 142/203 (69%)

Query: 13  LATGLQWTLLLSLVAFVGGGVIGLLVMTMRISRKAFPRNLARTYIELFQGTPLLMQLFLV 72
           L   + WTL+LS +AFV G V G  +M  RIS + + R  A  YIE  QG PLL+ LF+V
Sbjct: 14  LVQAIGWTLVLSAIAFVLGAVGGFGLMLARISPRPWLRWFAVVYIECIQGIPLLILLFIV 73

Query: 73  FFGIALLGVDISPWLAAAIALTLFTSAYLAEIWRGCVDSIAHGQWEASASLALNPLEQLR 132
           +FG+++ G+ +   +AA +A+ ++ SAYL +IWRGC++++   QWEAS  LAL+  + LR
Sbjct: 74  YFGLSVYGLSLPSLVAAGLAMMIYVSAYLGDIWRGCIEAMPKPQWEASECLALSRWQTLR 133

Query: 133 YVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANATFEPFMVYGLVAL 192
            VI+PQA+R+++ PTVGF VQ++K T++ S+IGF ELT+ G ++ N  F+PF+V+ LV  
Sbjct: 134 LVIIPQAVRLSLPPTVGFLVQIIKMTSLASVIGFVELTRAGQIINNTIFQPFLVFFLVGA 193

Query: 193 GYFLLCYPLSLSARYLERRLHAS 215
            YF LCYPLS  +  +E++L+ +
Sbjct: 194 FYFALCYPLSRWSEAMEKKLNVA 216