Pairwise Alignments

Query, 216 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  178 bits (452), Expect = 6e-50
 Identities = 90/200 (45%), Positives = 137/200 (68%), Gaps = 1/200 (0%)

Query: 17  LQWTLLLSLVAFVGGGVIGLLVMTMRISRKAFPRNLARTYIELFQGTPLLMQLFLVFFGI 76
           ++WT  L+L AFV G VI L V   R SR+ + R LAR Y+EL QGTPLL  LFL++FG+
Sbjct: 16  IRWTAALALTAFVIGAVIALGVAVARTSRQPWLRVLARIYVELVQGTPLLGVLFLLYFGV 75

Query: 77  A-LLGVDISPWLAAAIALTLFTSAYLAEIWRGCVDSIAHGQWEASASLALNPLEQLRYVI 135
             LLG++I+ + AAA A +L   A+L +IWRG ++S+  GQWEA++ + L   + +R+V+
Sbjct: 76  PMLLGIEINAFTAAAAAFSLSAGAFLGDIWRGAIESVPKGQWEAASCVGLRRWQVMRHVV 135

Query: 136 LPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANATFEPFMVYGLVALGYF 195
            PQA R+A+ PTV + VQ++K T++ +++G  ELT++G ++A +T     V+  VAL YF
Sbjct: 136 WPQAFRVALGPTVSYLVQLIKNTSLAALVGLVELTRSGQIVAGSTLAHLPVFCGVALCYF 195

Query: 196 LLCYPLSLSARYLERRLHAS 215
            +CYPL+  A  LE R++ +
Sbjct: 196 AICYPLARLALSLEGRMNVA 215