Pairwise Alignments

Query, 222 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  170 bits (431), Expect = 2e-47
 Identities = 85/215 (39%), Positives = 133/215 (61%)

Query: 1   MAYQFDFVPVLANTDLLLRGALFTLELTAIGAILGVALGTVGAVVRAWKIQPFAWCFGVY 60
           MAYQF F  +   T  L+ G L TL   A   +LG+A+G  G++   +  +P      VY
Sbjct: 1   MAYQFQFDALAPYTGQLVEGLLHTLGYAASSIVLGMAIGVAGSLALVYGGKPLRGVTRVY 60

Query: 61  VELIRNTPFLVQLFFIFFGLPSLGLKITEWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQ 120
           VE  RNTP LVQLF I+FGLP+LG+++    A V+++ +  GAY  E+ R+G+ ++PRG 
Sbjct: 61  VEFFRNTPALVQLFLIYFGLPNLGIRLEAPVAGVISLALYCGAYMVEVFRSGLMSVPRGL 120

Query: 121 LEAAAALAMTRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANFI 180
            EA AAL +   +   HV+ +PAL  V+P+L+SQ+++ ++G+++ SQI  E++  A +FI
Sbjct: 121 SEAGAALGLRPRQVLVHVLFVPALRNVFPSLASQMVLTLIGTSLISQIGVEDIFHAGSFI 180

Query: 181 QSRNFRAFETYALTTLVYLCMALMIRQLLNWIGRR 215
            SR FR+FE Y +   +Y      +R +L ++ RR
Sbjct: 181 DSRTFRSFEVYLVICAMYFVAVQALRVILGFVQRR 215