Pairwise Alignments

Query, 261 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 5e-27
 Identities = 83/249 (33%), Positives = 118/249 (47%), Gaps = 21/249 (8%)

Query: 23  AQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPR-GLDIDTAKLLADQLKVKLELTPV 81
           A A+ LDD+   G L+VA     PPFG + P  K + G DID A   A  L VK+EL P 
Sbjct: 24  AWADRLDDVRKAGVLRVAAFDGNPPFGYIDPASKKQVGHDIDLATEFAKSLGVKIELVPT 83

Query: 82  NSTNRIPFLTTGKVDLVISSLGKNAEREKVIDFSKAYAPFYLA--VFGPPEAAISSTDDL 139
           N  NRIP LT+GKVD+V +S     ER K +DF+    P++L    F   +  +     +
Sbjct: 84  NPANRIPLLTSGKVDVVFASFTITDERAKAVDFT---TPYFLVGQQFLAKKGVLKDAAQI 140

Query: 140 KGKTISVTRGAIEDIELTAVAPKEATIKRFEDNNSTIAAYLAGQVDLIASGNVVMV---- 195
           K   I   +G   +  L    P +A +  ++D+   +AA   G V  I +  V +     
Sbjct: 141 KDIRIGTEKGTTMESNLRKNYP-DAKVVLYDDSPFALAALRNGNVQAITNDGVKLTAQWN 199

Query: 196 AISERSPKRVPALKVKLKDSPVYVG--VNKNEPALLEKVNQILVAAKADGSLEKNAMQWL 253
           AI ++    +P + V    S  Y+G  V K E  LLE +N  LV ++ +G        W 
Sbjct: 200 AIPDKEKYEIPPITV----SKEYLGAAVPKGEARLLEALNTWLVDSEKNGRALAIYDTWF 255

Query: 254 ----KEPLP 258
               K PLP
Sbjct: 256 GPNSKAPLP 264