Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas simiae WCS417

Subject, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

 Score =  800 bits (2066), Expect = 0.0
 Identities = 407/419 (97%), Positives = 414/419 (98%)

Query: 1   MNLTELKQKPITDLLQLAEEMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD 60
           MNLTELKQKPITDLL++AE+MGIENMARSRKQDVIF+LLKKHAKSGEEISGDGVLEILQD
Sbjct: 1   MNLTELKQKPITDLLEMAEQMGIENMARSRKQDVIFALLKKHAKSGEEISGDGVLEILQD 60

Query: 61  GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN 120
           GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
Sbjct: 61  GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN 120

Query: 121 FDRPENAKNKILFENLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180
           FDRPENAKNKILFENLTPLFP  R+KMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
Sbjct: 121 FDRPENAKNKILFENLTPLFPNKRLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180

Query: 181 KAGKTIMLQNIAANIARNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240
           KAGKTIMLQNIAANI RNNPE HLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
Sbjct: 181 KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240

Query: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300
           QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
Sbjct: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300

Query: 301 FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI 360
           FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
Sbjct: 301 FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI 360

Query: 361 NRSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLIDKLKTTKTNDEFFLSMKRK 419
           NRSGTRREELLTADDELQRMWILRKLLHPMDE+AAIEFL+DKLK TKTNDEFFLSMKRK
Sbjct: 361 NRSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLVDKLKQTKTNDEFFLSMKRK 419