Pairwise Alignments

Query, 371 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 905 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  110 bits (275), Expect = 2e-28
 Identities = 98/378 (25%), Positives = 161/378 (42%), Gaps = 19/378 (5%)

Query: 5   AHILRLGIKELTSLRHDGVLLLFLFYAFTVAIYMPAAGSVIGVHNASVAFVDEDHSSLSR 64
           A +L +  +E   L  D V + F        + +   G  + V N + A  D+D +  SR
Sbjct: 535 ARLLAVASREGKELLRDKVRMAFALLGAMFMMVIFGYGISLDVENLAFAIYDQDQTPQSR 594

Query: 65  QMAEALQPPEFQAPIPLAYD--QLDKVMDSGEYTFVINVPANFQADLLAGRQPGVQVNVD 122
              E  +   + A  P   D  +L + +   E    + +P  F  DL AGRQP V    D
Sbjct: 595 AYLEGFRSSRYFAEQPPIRDSNELHRRLQRSEIKLALEIPPGFGRDLYAGRQPSVAAWFD 654

Query: 123 ATAMSQAFMGAGYIGRIFQ---RELLTYSGQAAANQAPALLTTRALFN-----TNLEGGW 174
                +A     Y+  + Q   ++L   S     + A A L TR  +N      N  G  
Sbjct: 655 GGMPFRAETSRNYVEAVHQENLQQLAELSSLPRNHPAAAKLETRFRYNQDVVSVNAIGPG 714

Query: 175 FLAVIQIVNNITILAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIWSNMLVVVLC 234
            +A+I     +  +  +LT   ++RE+E G++ +    PLT LE +L K  +  L V L 
Sbjct: 715 VMALI-----LAFIPAMLTALGIVREKELGSITNFYATPLTRLEFLLGK-QTPYLAVSLV 768

Query: 235 TWLSLEVVVKGLLGVPLAGSLGLFLFVTALYLFASTALGIFLATLARSTPQFGLLAIPVI 294
               L  + + L GVP  GS     F   LY+ A+T++G+ ++   R T    +L   +I
Sbjct: 769 NLAVLVAMNRWLFGVPFKGSGLTLAFGGLLYVLATTSMGLLISAFTR-TQIAAILGTMII 827

Query: 295 --IPMLLLSGGSTPLDSMPEWLQWVMQGSPSTHFVSLSAAILFRDAGVSVVWPDVLALAG 352
             +P +  SG   P  S+      +    P+ HF+ ++     +   +  +WP  LAL G
Sbjct: 828 TSLPTIQFSGLIVPRSSLEGAAALMGMLFPAGHFLDIAVGTFTKALDLRQLWPQCLALFG 887

Query: 353 IGLLFFAVALARFRKSLA 370
             + F  ++L   +K  A
Sbjct: 888 FFVGFTGLSLIMLKKQEA 905