Pairwise Alignments

Query, 371 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score =  112 bits (280), Expect = 4e-29
 Identities = 102/377 (27%), Positives = 162/377 (42%), Gaps = 21/377 (5%)

Query: 7   ILRLGIKELTSLRHDGVLLLFLFYAFTVAIYMPAAGSVIGVHNASVAFVDEDHSSLSRQM 66
           +L + ++E   L  D V L F        + +   G  + V N + A  D+D S  SR  
Sbjct: 538 LLAVAVREGKELLRDKVRLAFALLGAVFMMVIFGYGISLDVENLAFAVHDQDQSPQSRAY 597

Query: 67  AEALQPPEF---QAPIPLAYDQLDKVMDSGEYTFVINVPANFQADLLAGRQPGVQVNVDA 123
            EA +   +   QAPI  +  +L + +   E    + +P  F  DL AGRQP V   +D 
Sbjct: 598 LEAFRGSRYFAEQAPIRDS-SELHQRLQRSEIKLALEIPPGFGRDLYAGRQPVVAAWLDG 656

Query: 124 TAMSQAFMGAGYIGRIFQ---RELLTYSGQAAANQAPALLTTRALFN-----TNLEGGWF 175
               +A     Y+  + Q    +L   S Q    Q P  L TR  +N      N  G   
Sbjct: 657 GMPFRAETSRNYVEAVHQANLEQLAKASPQPQPRQDPVRLETRFRYNQDVVSVNAIGPGV 716

Query: 176 LAVIQIVNNITILAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIWSNMLVVVLCT 235
           +A+I     +  +  +LT   ++RE+E G++ +    PLT LE +L K     L V L  
Sbjct: 717 MALI-----LAFIPAMLTALGIVREKELGSITNFYATPLTRLEFLLGK-QMPYLAVSLVN 770

Query: 236 WLSLEVVVKGLLGVPLAGSLGLFLFVTALYLFASTALGIFLATLARSTPQFGLLAIPVI- 294
              L  + + L  VPL GS+         YL A+T+LG+ ++   R T    +L   +I 
Sbjct: 771 LALLVAMNRWLFAVPLKGSVLALACGGVAYLLATTSLGLLISAFTR-TQIAAILGTMIIT 829

Query: 295 -IPMLLLSGGSTPLDSMPEWLQWVMQGSPSTHFVSLSAAILFRDAGVSVVWPDVLALAGI 353
            +P +  SG   P  S+      + Q  P+ +F+ ++     +  G+  +WP  L L   
Sbjct: 830 SLPTIQFSGLIVPRSSLDGAAAVMGQLFPAGYFLDIAVGTFTKALGLRELWPQCLILLSF 889

Query: 354 GLLFFAVALARFRKSLA 370
              F  ++LA  +K  A
Sbjct: 890 FAAFTGLSLAMLKKQEA 906