Pairwise Alignments

Query, 371 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 85/363 (23%), Positives = 167/363 (46%), Gaps = 24/363 (6%)

Query: 13  KELTSLRHDGVLLLFLFYAFTVAIYMPAAGSVIGVHNASVAFVDEDHSSLSRQMAEALQP 72
           +E   L+ D +          + +++   G  + V + S A +D D S++SR     +  
Sbjct: 563 REALELQRDPIRGTLAVLGSVILMFVIGYGINLDVEDLSFAVLDRDDSTISRDYVLDIAG 622

Query: 73  PEF---QAPIPLAYDQLDKVMDSGEYTFVINVPANFQADLLAGRQPGVQVNVDATAMSQA 129
             +   + PI   Y  +D+ M  GE +  I +P  F  D+L G+   V   +D     +A
Sbjct: 623 SRYFIEKEPIR-DYADMDRRMRDGELSLAIEIPPGFGRDVLRGKTVEVGAWIDGAMPQRA 681

Query: 130 FMGAGYIGRIFQRELLTYSGQA---AANQAPALLTTRALFNTNLEGGWFLAVIQIVNNIT 186
               GY+  + Q  L   + +    AA Q+   + TR  +N +++    +A++  V  + 
Sbjct: 682 ETVRGYVQGMHQTWLARKASEIYGNAATQSSFSIETRYRYNPDVKS--LVAMVPAVIPLL 739

Query: 187 ILAI--ILTGTALLREREHGTLDHLLVLPLTALEIMLAKIWSNMLVVVLCTWLSLEVVVK 244
           ++ I  +L   +++RE+E G++ +L V P T LE ++ K    + + +L  +L L     
Sbjct: 740 LMLIPAMLAALSVVREKELGSIVNLYVTPTTRLEFLIGKQLPYVALGML-NFLLLTAFAI 798

Query: 245 GLLGVPLAGSLGLFLFVTALYLFASTALGIFLATLARS--TPQFGLLAIPVIIPMLLLSG 302
            +  VP  GS   +     L++  +T++G+ +++  +S     FG  A+  +IP    SG
Sbjct: 799 FIFQVPFTGSYLAYATGALLFVIIATSIGLVMSSFMKSQIAAIFG-TALLTLIPATQYSG 857

Query: 303 GSTPLDSMPEWLQWVMQGSPSTHFVSLSAAILFRD---AGVS------VVWPDVLALAGI 353
              P+ S+     ++    P+T+F+++S     +    AG+S      ++   +L +AG 
Sbjct: 858 MIDPVSSLQGAGAFIGNIYPATYFMTISRGTFSKGLDFAGLSGSFLPLLIAIPLLLIAGA 917

Query: 354 GLL 356
            LL
Sbjct: 918 ALL 920