Pairwise Alignments

Query, 905 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 578 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  326 bits (836), Expect = 2e-93
 Identities = 202/573 (35%), Positives = 304/573 (53%), Gaps = 81/573 (14%)

Query: 1   MSALALQATGINHRYG--QQQALVDITFNLPAGTRCGLIGPDGAGKSSLLGLIAGVKKLQ 58
           M+   +   G+  R+    + A+  +   + AG   GL+GPDGAGK++L+ ++AG+ K  
Sbjct: 1   MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPD 60

Query: 59  DGQLNVLGGAIEDRRHRNSLYPRIAFMPQGLGGNLYPELSISENIRFFATLFGLSKADCE 118
            G   V+G   +  ++  +L+  + +MPQ  G  LY +L++ EN+  +A L  ++    +
Sbjct: 61  SGSATVIG--FDPIKNDGALHAVLGYMPQKFG--LYEDLTVMENLNLYADLRSVTGEARK 116

Query: 119 QRMHNLLLSTDLARFADRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRR 178
           Q    LL  T L  F  R AGKLSGGMKQKLGL C L+ +P +L+LDEP  GVDP+SRR 
Sbjct: 117 QTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRE 176

Query: 179 FWELVESVRGERPQLTLLVATAYMEEAEQFEHCLMLDRGKLIADGLSSELADATPSGKLD 238
            W++V  + GE   + +L +T+Y++EAEQ    L+++ G+L+  G    L   T +G+  
Sbjct: 177 LWQMVHELAGE--GMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQ-TMAGRSF 233

Query: 239 EAFTHFQGN----------------SAHGNQPLLIPPRESDTTDI-------AIEAHDLT 275
              +  +GN                   G    LI  +E+   DI        I  ++ T
Sbjct: 234 LMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPDDIRHADGMPEININETT 293

Query: 276 LRFGD-------------------------------------------FTAVNKVSFAIG 292
            RF D                                           F A + V+FA+ 
Sbjct: 294 PRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKELTKKFGDFAATDHVNFAVK 353

Query: 293 RGEIFGFLGSNGCGKTTTMKVLTGLMPATEGSATLLGNPVNAKDLATRKRVGFMSQSFSL 352
           RGEIFG LG NG GK+TT K++ GL+  T G A +LG  +       R+ +G+M+Q FSL
Sbjct: 354 RGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLGYMAQKFSL 413

Query: 353 YGELSVRQNLVLHAQLFDLPKAESGPRIDELIQRFDLGDVAEQPSGELPLGLRQRLSLAV 412
           YG L+V QNL   + ++ L       +I  + + F L  +A   + ELPLG +QRL+LA 
Sbjct: 414 YGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALAC 473

Query: 413 AVLHRPEVLILDEPTSGVDPAARDDFWRLLIELSREQGVTIFLSTHFMNEAQRCDRISLM 472
           +++H P++L LDEPTSGVDP  R +FW L I    E+GVT+ ++THFM+EA+ CDRI L+
Sbjct: 474 SLMHEPDILFLDEPTSGVDPLTRREFW-LHINSMVEKGVTVMVTTHFMDEAEYCDRIGLV 532

Query: 473 HAGEVLACDTPDALQRQFHGD-----TLEAAFV 500
           + G+++A  TPD L+ Q   D     T+E AF+
Sbjct: 533 YRGKLIASGTPDDLKAQSANDEQPDPTMEQAFI 565