Pairwise Alignments

Query, 559 a.a., type II secretion system protein E from Pseudomonas simiae WCS417

Subject, 557 a.a., Type II secretion system protein from Pseudomonas putida KT2440

 Score =  613 bits (1580), Expect = e-180
 Identities = 330/560 (58%), Positives = 415/560 (74%), Gaps = 24/560 (4%)

Query: 2   PVDQRLELHQLLPALVEGRLI----TPEIAQRLSALPASNTLHPLESIAA---------- 47
           P +  L+L ++L AL+  + +    T ++ +  +A PAS   HPLE IAA          
Sbjct: 4   PDNPALDLKRVLQALLADQHLHASDTLQVLEHAAAHPAS---HPLEHIAACSLESRQHPG 60

Query: 48  QGLCLETLTEWLAQRAGQPYLRIDPLKIDVATVVPLMSHAFAQRHAILAVAVDAQTVTVA 107
           Q L LE L +WLA + GQPYLRIDP+++D+  V  L+S AFAQRH IL VA DA +VTVA
Sbjct: 61  QPLDLEHLCQWLADKVGQPYLRIDPMQLDLPQVTSLISPAFAQRHGILIVAADASSVTVA 120

Query: 108 SAQPHVTSWEAGLSQVLKRSIKRVVANPQDITRCIGEFYRLAKSVSGAD-QKVVAAGNVD 166
           SAQP    W+A L++ L RSI+RV+A+PQ I +    F+RLA+SV GA  Q+  + G ++
Sbjct: 121 SAQPFQDDWQADLARSLGRSIRRVLASPQQIRQSAQSFHRLAQSVKGAQYQQSASLGELE 180

Query: 167 -LLNLGAREQEPDANDAHIVNIVDWLLQYAFAQRASDIHIEPCREQGRVRFRIDGLLHDV 225
            LL LG R+ E  A+DAHIV+IVDWLLQYA  QRASDIH+EP REQG++R+RIDGLLH V
Sbjct: 181 QLLELGKRQAEASADDAHIVHIVDWLLQYAIEQRASDIHLEPRREQGQLRYRIDGLLHTV 240

Query: 226 YQFPPQVTMAVVSRLKSLGRMNVAEKRRPQDGRVKTKSPTGAEVELRLSTLPTAFGEKLV 285
           Y FP  VT+A+VSRLK LGRM+VAEKRRPQDGR++++ P G EVELRLSTLPT FGEKLV
Sbjct: 241 YAFPAGVTLALVSRLKHLGRMDVAEKRRPQDGRLQSRLPGGGEVELRLSTLPTPFGEKLV 300

Query: 286 LRIFDPQVLLKGFDQLGLSADDQRRWQSMTRQTHGIILVTGPTGSGKTSTLYTTLRQLAT 345
           LR+FDP  L +GFD+LGL      +WQ + RQ  GIILVTGPTGSGKTSTLYT+L+ LAT
Sbjct: 301 LRLFDPHQLQEGFDRLGLHGQQLAQWQRLLRQRQGIILVTGPTGSGKTSTLYTSLKLLAT 360

Query: 346 REVNLCTVEDPIEMVEPTFNQMQVQHNIDLTFASGIRALLRQDPDIIMIGEIRDQETAEM 405
            +VNLCT+EDPIE +EP FNQ+QVQ  +DL FA+ +RA+LRQDPDIIMIGEIRD+ETA +
Sbjct: 361 PQVNLCTIEDPIERLEPAFNQLQVQPALDLGFANAVRAMLRQDPDIIMIGEIRDRETALV 420

Query: 406 AIQAALTGHLVLSTLHTNDAPSAISRLQELGIAHYLIKATLLGVMAQRLVRVLCPHCKRT 465
           A+QAALTGHLVLSTLHTNDA +AI+RLQELG+A YLIKATL+GVMAQRLVR +C  C+  
Sbjct: 421 AVQAALTGHLVLSTLHTNDACAAITRLQELGVADYLIKATLIGVMAQRLVRTVCTDCQ-- 478

Query: 466 LGDAHEAVGCGECRQSGYRGRAGVYEIMVLNEALKTLITPGADLHALRQKAIAQGMCSLR 525
                 +  C  CR +G++GR G++E++  ++ L+ LI P ADL  LR++A+A G+  LR
Sbjct: 479 ---TGSSATCRACRGTGFQGRTGLFELLEPSDTLRALIGPDADLTCLRRQALADGLVDLR 535

Query: 526 MAGVKKVEAGLTTMAEVLRV 545
             G  KV AG T   EVLRV
Sbjct: 536 RCGEAKVAAGQTRAEEVLRV 555