Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 438 a.a., porin from Pseudomonas simiae WCS417

 Score =  425 bits (1092), Expect = e-123
 Identities = 226/455 (49%), Positives = 299/455 (65%), Gaps = 23/455 (5%)

Query: 3   KSTLALAVALGAIAQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGANKNEEWGQGFDLR 62
           K+ LALAV+LGA AQQA A+GF++DSKA+L LRNFY N D RN   A+ ++EWGQ F   
Sbjct: 4   KTCLALAVSLGA-AQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAAS-DKEWGQAFMFN 61

Query: 63  FISGYTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVND 122
           + SG+T+GTVG G+D     G+RLD+ G      +   A   +  G++FP + +GKAV+D
Sbjct: 62  YQSGFTEGTVGLGLDLQEWYGLRLDASG------RAGKAGADNTPGSVFPLD-DGKAVHD 114

Query: 123 YSSLGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQ 182
           +S  G+T K +I+QT+LK G L PKLPV+ T DGRLLPQTF+G Q+ + D +D+ L+ G+
Sbjct: 115 FSKTGVTGKLRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGK 174

Query: 183 IEKAKGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDFYK 242
           IE+   RNSS+ + LS++GAN      + SN+F Y G DY ++K L  QYYY +LE+FY+
Sbjct: 175 IEQVMDRNSSNGQGLSIAGANDP-VKGKASNQFYYGGVDYAVSKRLQVQYYYASLENFYQ 233

Query: 243 QHFLGLTHNWAIGPGVLKSDLRYFNSSDDGANGNESAY---FTTGNYQGFRAGKGKVDNN 299
           QHFLGL HNW +  G LKSDLRYF S+ DG NG+ +     + +  Y G     GKVDN 
Sbjct: 234 QHFLGLVHNWQLPVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNR 293

Query: 300 LYSGLFLYTVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQA 359
           L+S +F Y ++GH+   GYQ + G SDFP +NQG G S YL T+ Q  KF  AGE+    
Sbjct: 294 LWSAMFTYALSGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVG 353

Query: 360 RYAYDFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEGPLK 419
            YAYDFA +GVPGL + V Y+ GS I TV            SEWERD+ + YVIP G LK
Sbjct: 354 SYAYDFAGLGVPGLRSSVTYIHGSHIRTVG--------RDNSEWERDLRLDYVIPTGTLK 405

Query: 420 NLGVAWKNAMWRTDIAGARDQDENRLIVSYSIPLL 454
            LG  W++A+ R +     D+DE RLIVSYSIPL+
Sbjct: 406 GLGFTWRSAVLRGN--DTADKDETRLIVSYSIPLM 438