Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  409 bits (1051), Expect = e-119
 Identities = 217/459 (47%), Positives = 298/459 (64%), Gaps = 42/459 (9%)

Query: 8   LAVALGAIAQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGA-NKNEEWGQGFDLRFISG 66
           L  +LG       +A F+ DSKA L +RNFY N DNR+GT A +K EEWGQ F L + SG
Sbjct: 11  LTGSLGVALSPLASADFLSDSKANLSMRNFYFNNDNRDGTAAPSKTEEWGQAFILNYQSG 70

Query: 67  YTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVNDYSSL 126
           +T GTVGFG+DAIG+LG+ LDSG G +             G ++ P++ +GKA ++++  
Sbjct: 71  FTDGTVGFGLDAIGMLGITLDSGAGRH------------VGSSMIPND-DGKATDNWARG 117

Query: 127 GLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIEKA 186
           G TAKA+ +++EL+ G L+P LP++++NDGRLLPQ+F GGQIT+ DI +LTL+GGQ++  
Sbjct: 118 GATAKARFAKSELRYGYLRPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHT 177

Query: 187 KGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDFYKQHFL 246
            GR SS    L+++G        ++SN F YAG DY++TKDL  QYYY NLED+Y+QHF 
Sbjct: 178 TGRGSSDRSGLAVAGGT------QESNTFNYAGADYQVTKDLMLQYYYANLEDYYQQHFA 231

Query: 247 GLTHNWAIGP-GVLKSDLRYFNSSDDGANGN---ESAYFTTGNYQGFRAGKGKVDNNLYS 302
           GL H   +G  G LK+DLRYF ++ DG N +    +  +  G Y   + G G++DNN +S
Sbjct: 232 GLIHVLPLGDYGSLKTDLRYFKTTSDGKNSSVAGRAEGYKLGGYT--KNGTGEIDNNTWS 289

Query: 303 GLFLYTVAGHTFGGGYQVSNGSSDFPWLNQG-------DGSSAYLTTDMQIQKFARAGER 355
             F+Y++  H    GYQ  +  S+F  LNQG        GSS YL TD  +Q F +AGER
Sbjct: 290 AAFIYSLGPHAITAGYQQVSDDSNFAQLNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGER 349

Query: 356 TWQARYAYDFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPE 415
           T  A+YAYDFA +GVPGL A V+YLKG  I T +        N  SEWERDI++ YV+  
Sbjct: 350 TAFAQYAYDFASLGVPGLKASVMYLKGDHILTASG-------NDASEWERDISLDYVVQS 402

Query: 416 GPLKNLGVAWKNAMWRTDIAGARDQDENRLIVSYSIPLL 454
           G  KN+G  W+N + R+++  ARDQD+NR+ V+YSIPL+
Sbjct: 403 GTFKNVGFGWRNGVSRSEV--ARDQDQNRVFVNYSIPLM 439