Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 427 a.a., porin from Pseudomonas simiae WCS417

 Score =  332 bits (851), Expect = 1e-95
 Identities = 177/445 (39%), Positives = 264/445 (59%), Gaps = 40/445 (8%)

Query: 13  GAIAQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGANKNEEWGQGFDLRFISGYTQGTV 72
           G +      A F++DSKA L L+N+Y N D R   G +K EEW QGF L   SG+T+GTV
Sbjct: 18  GGLLCAPAQADFIKDSKADLDLKNYYFNRDYREDAGQSKREEWAQGFILNLKSGFTEGTV 77

Query: 73  GFGVDAIGLLGVRLDSGGGTNGA---TKPSGANPGSYGGTIFPSEHNGKAVNDYSSLGLT 129
           GFGVD +G+LG++LDS    +G+   ++ + A PG       PS ++ +A ++YS  G+T
Sbjct: 78  GFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGK------PS-YSKRAHDEYSKYGVT 130

Query: 130 AKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIEKAKGR 189
            K + +Q+EL+ G L P LP +  N  RL PQTF+G Q+T+ DI  L L+GGQI++ K R
Sbjct: 131 GKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQTKQR 190

Query: 190 NSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDFYKQHFLGLT 249
            S+  E++ L+  +    +   S++F +AGGDYK+T  +T  Y++  LED Y+QHF+GL 
Sbjct: 191 ESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQHFVGLK 250

Query: 250 HNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLYSGLFLYTV 309
           +++A+G G LK+D+RYF++   GA                    GKVDN   S   +++ 
Sbjct: 251 NSFALGGGTLKTDIRYFDADKSGA-----------------GLAGKVDNRALSTRAMFSY 293

Query: 310 AGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARYAYDFAKVG 369
            GH+ GGGYQ   G + F ++   DG++ YL ++ Q+  F++  ER W ARY +DFA +G
Sbjct: 294 KGHSLGGGYQEQYGDTPFTYV---DGTNTYLFSEYQLSNFSQTNERVWHARYDFDFAALG 350

Query: 370 VPGLTAGVVYLKGSDIDTVANTASRTQFNGQS-EWERDITVAYVIPEGPLKNLGVAWKNA 428
           VPGLT    + KG       + A    F G+  EWERDI + YV   G LK + + W+N 
Sbjct: 351 VPGLTFSTRWAKG-------DQAQVKGFAGEGREWERDIDLGYVFQSGTLKGVSLRWRNG 403

Query: 429 MWRTDIAGARDQDENRLIVSYSIPL 453
           + + +    RD +ENR+IV Y++ L
Sbjct: 404 LSKANY--LRDMNENRVIVGYTVAL 426