Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 450 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  303 bits (776), Expect = 7e-87
 Identities = 186/469 (39%), Positives = 260/469 (55%), Gaps = 42/469 (8%)

Query: 2   KKSTLALAVALGAIAQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGANKNEEWGQGFDL 61
           K   +  A+A G +AQQ  A GF++DSKA++  R  Y + D R+  GA++ +    G  L
Sbjct: 6   KVKRILAALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQRQTL-TGLRL 64

Query: 62  RFISGYTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVN 121
            F SGYT+G VG G+D   L G  L      +G T P  A   S   T+ P   +G  V+
Sbjct: 65  DFQSGYTEGVVGLGLDLQALAGFTL------SGGTSPHNA---STVNTVSPVTTDGSPVD 115

Query: 122 DYSSLGLTAKAKISQTELKLGT-LQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVG 180
           ++S +G  A+ K S+TELK G  L   LPV+I+NDGRLLP +FQG  +T+N+ ++LTL G
Sbjct: 116 NWSRIGGNARFKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNG 175

Query: 181 GQIEKAKGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDF 240
           G + +A GR SS+   +S  GA       + S+ F +AGGD+ + K+L  QYYY NLED+
Sbjct: 176 GFLNRAIGRASSNWAGISGGGA-------KGSDGFAFAGGDWNVRKNLKLQYYYANLEDY 228

Query: 241 YKQHFLGLTHNWAIGPGV-LKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNN 299
           Y Q+FLGL H++ +G G  L +DLRYF S  DG NG +S Y     Y       GK+DN 
Sbjct: 229 YSQNFLGLIHSFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNE----NGKIDNT 284

Query: 300 LYSGLFLYTVAGHTFGGGYQVSNGSSDFPWLN-----------QGDGS--SAYLTTDMQI 346
            +S  F Y   GH    G+Q  +  S F  +N           +G+G   S YL TD+ +
Sbjct: 285 TWSLAFTYKAGGHALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMV 344

Query: 347 QKFARAGERTWQARYAYDFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERD 406
             F RAGE +    Y+YDFA +GVPGL AG  Y+ G DI    NT +       +EWE D
Sbjct: 345 NSFTRAGENSTFGLYSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTT----GRYNEWESD 400

Query: 407 ITVAYVIPEGPLKNLGVAWKNAMWRTDIAGA--RDQDENRLIVSYSIPL 453
             + YV+  G  K LG   +  ++RT +  +  +DQD+ R  V+Y+  L
Sbjct: 401 YRLDYVLQSGTFKGLGFTLRKGVFRTGLPDSTLKDQDQVRFFVNYTYAL 449