Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  252 bits (643), Expect = 2e-71
 Identities = 165/451 (36%), Positives = 236/451 (52%), Gaps = 50/451 (11%)

Query: 8   LAVALGAIAQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGAN---KNEEWGQGFDLRFI 64
           +A AL A A  A  AGF+E ++ATL  RN++ + D  +  GA+   + +EW QGF L   
Sbjct: 20  IAAALCAEAT-AEEAGFIEGARATLQARNYFFSRDYADIKGASTQSRTQEWAQGFILNAS 78

Query: 65  SGYTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVNDYS 124
           SGYTQGT+G GVD  GLLG +LDS         P  A  G     + PS  +GK+ ++YS
Sbjct: 79  SGYTQGTLGVGVDVTGLLGFKLDSS--------PEHARSG-----LLPSLDSGKSADEYS 125

Query: 125 SLGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIE 184
            LG   K K+SQTELK+G L P LPV++ +D RLLP T+QG  + + +   LTL  GQ  
Sbjct: 126 RLGAAIKFKVSQTELKVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFR 185

Query: 185 KAKGRNSSSNEN---LSLSGANSRGATWRDSNKFIYAGGDYKITKDLTA-QYYYGNLEDF 240
               R+SS+++    L     N        S++F Y G DY    + T+   +   LED 
Sbjct: 186 STSLRDSSNSQKMYALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDI 245

Query: 241 YKQHFLGLTHNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNL 300
           Y+Q F    H   +G   L  +  YF++ +DG+          G+Y          DN+ 
Sbjct: 246 YQQRFYSFKHAEPLGSWTLGVNAGYFDAREDGSK-------VAGDY----------DNHA 288

Query: 301 YSGLFLYTVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQAR 360
              LF     GHTF  GYQ   G   F    Q   ++  +   +   +F+  GER+WQ R
Sbjct: 289 LFSLFSAKTGGHTFYVGYQQIGGDDGF---IQVGANTNPMGNTLPTYEFSAPGERSWQVR 345

Query: 361 YAYDFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEGPLKN 420
           + Y+F  +G+PGLT+ + Y+KG D++T      R +       ERD+ +AYV+  GPL  
Sbjct: 346 HDYNFVALGLPGLTSTLRYVKGRDVETGLGFEGRDR-------ERDLDLAYVVQSGPLAG 398

Query: 421 LGVAWKNAMWRTDIAGARDQDENRLIVSYSI 451
           LG+  +N M R++     D DENRLI+SY+I
Sbjct: 399 LGIRVRNVMARSNY--RTDIDENRLILSYTI 427