Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  280 bits (715), Expect = 8e-80
 Identities = 168/454 (37%), Positives = 250/454 (55%), Gaps = 48/454 (10%)

Query: 3   KSTLALAVALGAIAQQAGAAGFVEDSKATLGLRNFYINTDNRN-GTGANKNEEWGQGFDL 61
           K TLA +  L  +A  A AA FVED K +L LRNFY N D RN G   +K +EW QGF L
Sbjct: 6   KKTLACSATL-LVAPYASAA-FVEDFKGSLELRNFYYNRDFRNDGATQSKRDEWAQGFIL 63

Query: 62  RFISGYTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVN 121
              SG+T+G VGFG+DA+GLLGV+LDS             +P   G  +   + + +  +
Sbjct: 64  NLQSGFTEGPVGFGIDAMGLLGVKLDS-------------SPDRTGSGLLAYDSDRQVED 110

Query: 122 DYSSLGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGG 181
           +Y     TAKA++ +TEL++G + P +P++ +N+ RLLPQ F+GG +T NDI  LT+   
Sbjct: 111 EYGKFVATAKARMGKTELRIGGVNPLMPLLWSNNSRLLPQVFRGGSLTVNDIDKLTVTAT 170

Query: 182 QIEKAKGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDFY 241
           +I   K RNS+  E+L+ +G         +++ + Y   D+K  KD+T   +   LED Y
Sbjct: 171 RINAVKQRNSTDFESLTATGYAP-----VEADHYNYLAFDFKPAKDMTFSLHAAELEDLY 225

Query: 242 KQHFLGLTHNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLY 301
           K +F G+     +  G + +D+R F++S+ G+                    G+VDN   
Sbjct: 226 KSYFAGIKVIKPLWEGNVIADVRVFDASETGSK-----------------KLGEVDNRTL 268

Query: 302 SGLFLYTVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARY 361
           S  F Y++ GHT GGGYQ + G + F ++N   G+  YL  +  +  F    ER W ARY
Sbjct: 269 SSYFAYSIKGHTIGGGYQKAWGDTSFAFVN---GTDTYLFGESLVSTFTAPEERVWFARY 325

Query: 362 AYDFAKVGVPGLTAGVVYLKGSDID---TVANTASRTQFNGQ--SEWERDITVAYVIPEG 416
            +DFA +GVPGL     Y+KG D++     +  A+  + NG+   EWER   ++YVI  G
Sbjct: 326 DFDFAALGVPGLLFTTRYMKGDDVNPDLLTSRQAASLRLNGEDGKEWERVTDISYVIQSG 385

Query: 417 PLKNLGVAWKNAMWRTDIAGARDQDENRLIVSYS 450
           P K +   W+N+  R+  A +   +ENRLI+ Y+
Sbjct: 386 PAKGVSFQWRNSTNRSTYADS--ANENRLIMRYT 417