Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  276 bits (707), Expect = 7e-79
 Identities = 160/441 (36%), Positives = 234/441 (53%), Gaps = 41/441 (9%)

Query: 16  AQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGA-NKNEEWGQGFDLRFISGYTQGTVGF 74
           A Q   A F+ D   +L LRNFY + D    +   ++  EW QGF LR  SGYT G VGF
Sbjct: 18  ACQTAQAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGF 77

Query: 75  GVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVNDYSSLGLTAKAKI 134
           G+DA G+LG++LDS             +P   G  + P   + +A +DY+    T KA++
Sbjct: 78  GLDAAGMLGLKLDS-------------SPDRSGSGLLPRGSDKRAADDYAKAVATFKARL 124

Query: 135 SQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIEKAKGRNSSSN 194
           +Q+ELK G L P+LP++ +N  RL PQ F G Q+ + D+   T    Q++  K R+S+  
Sbjct: 125 AQSELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDY 184

Query: 195 ENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDFYKQHFLGLTHNWAI 254
           E+L+        +    S++  YAG DY+   +LT   +   LED +++ F G      +
Sbjct: 185 EDLTAMAQQGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRL 244

Query: 255 GPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLYSGLFLYTVAGHTF 314
           GPG + ++ R+FN+ + G                 RA  G VDN   S  F Y+V GHTF
Sbjct: 245 GPGDVFTEWRWFNAREQG-----------------RALLGGVDNQTLSTNFGYSVQGHTF 287

Query: 315 GGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARYAYDFAKVGVPGLT 374
            GGYQ   G + + ++    G+  YL ++ Q+  FA A ER W  RY Y+FA VG+PGLT
Sbjct: 288 SGGYQKVRGDTAYAYVG---GTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLT 344

Query: 375 AGVVYLKGSDID--TVANTASRTQFNGQS---EWERDITVAYVIPEGPLKNLGVAWKNAM 429
             V Y+KG  +D   +A+   R    G     EWER   + YV+  G L+N+ + W+NA 
Sbjct: 345 FNVRYVKGDQVDPQRIASVKGRALAAGDGEGREWERTTDITYVVQSGALRNVSLRWRNAS 404

Query: 430 WRTDIAGARDQDENRLIVSYS 450
            R++ A A   DENR+IV Y+
Sbjct: 405 MRSNFADA--ADENRVIVGYT 423