Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  290 bits (742), Expect = 6e-83
 Identities = 179/457 (39%), Positives = 243/457 (53%), Gaps = 52/457 (11%)

Query: 1   MKKSTLALAVALGAIAQQAGA-AGFVEDSKATLGLRNFYINTDNRNGTGAN-KNEEWGQG 58
           M ++    A  L  +A    A A F+ DS A L LRN YIN D R       K EEWGQG
Sbjct: 8   MNRTHFLSAAWLATVALPMPALADFIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQG 67

Query: 59  FDLRFISGYTQGTVGFGVDAIGLLGVRLDSGGGT-NGATKPSGANPGSYGGTIFPSEHNG 117
           F  +  SG+T+G VGFGVDA+G LG++LDS     N    P G           P+ H  
Sbjct: 68  FTAKLESGFTEGPVGFGVDALGQLGIKLDSSRDRRNTGLLPFG-----------PNSH-- 114

Query: 118 KAVNDYSSLGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLT 177
           + V+DYS LGLT K ++S++ L+LGTLQP LPV++ ND RLL  +FQGG +T+ D+  LT
Sbjct: 115 EPVDDYSELGLTGKVRVSKSTLRLGTLQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLT 174

Query: 178 LVGGQIEKAKGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNL 237
              G++ KA  R+SS  +++    A+        S+   + GG Y IT   T  YYY  L
Sbjct: 175 FNAGRLTKANLRDSSGRDDIGYGAAS--------SDHLDFGGGSYAITPQTTVSYYYAKL 226

Query: 238 EDFYKQHFLGLTHNWAIGPGV-LKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKV 296
           +D Y+Q F+GL     +  GV L+SDLRYF+S +DGA                RA  G +
Sbjct: 227 QDIYRQQFVGLIDTRPLAEGVSLRSDLRYFDSRNDGAE---------------RA--GNI 269

Query: 297 DNNLYSGLFLYTVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERT 356
           DN  ++ +F   V  H F   +Q  +G S FP++N GD  +  L T      F RAG  +
Sbjct: 270 DNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDPFTVNLVT---YNTFTRAGLDS 326

Query: 357 WQARYAYDFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEG 416
           WQ RY YDF  +G+PGL+    Y  G   +T   T  R       E ERD  + YVI  G
Sbjct: 327 WQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVTNGR-------ERERDTDITYVIQSG 379

Query: 417 PLKNLGVAWKNAMWRTDIAGARDQDENRLIVSYSIPL 453
           P K++ + W+N  +R+        DENRLI+ Y++ L
Sbjct: 380 PFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYTLAL 416