Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  274 bits (700), Expect = 4e-78
 Identities = 174/451 (38%), Positives = 245/451 (54%), Gaps = 51/451 (11%)

Query: 6   LALAVALGAIAQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGANKN---EEWGQGFDLR 62
           +AL + L +    A   GF EDSKATL  RN+Y + D  +  GANK    EEW QGF L 
Sbjct: 7   VALGLTLLSQPLLAAEGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQGFILD 66

Query: 63  FISGYTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVND 122
           F SGYT G VGFGVDA+GLLG++LDS         P   N G     + P   +G+A ++
Sbjct: 67  FKSGYTPGPVGFGVDALGLLGIKLDSS--------PDRTNTG-----LLPVHGDGRAADE 113

Query: 123 YSSLGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQ 182
           YS L  T KA++S+TEL+ G LQP LPV+  +D RLLP T+QG  +++++I  LT+  G 
Sbjct: 114 YSRLAPTFKARLSKTELRAGELQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGH 173

Query: 183 IEKAKGRNSSSN--ENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTA-QYYYGNLED 239
           ++    RN   +   N  L     R A   +S+ F Y GGDY    + ++   +YG LED
Sbjct: 174 LKSTHLRNEGGDGKMNAMLGHVPMRQA---ESDAFNYVGGDYAFNANQSSVSLWYGQLED 230

Query: 240 FYKQHFLGLTHNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNN 299
            Y+Q F+GL H+  +G  VL ++L YF + + G                  A  G +DN 
Sbjct: 231 IYQQGFVGLKHSKPVGDWVLSANLGYFTAREQG-----------------DALLGNIDNQ 273

Query: 300 LYSGLFLYTVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQA 359
            +  LF     GH+F  GYQ   G S FP   +   + + L  ++   +FA   ER++Q 
Sbjct: 274 AFFSLFTARHGGHSFHAGYQGIYGDSPFP---RVFANISPLGNEVPTYEFAYTDERSYQV 330

Query: 360 RYAYDFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEGPLK 419
           RY Y+FA +GVPGLTA V Y+ G+++DT      R +       ERD+ + Y +  G LK
Sbjct: 331 RYDYNFAAMGVPGLTATVRYITGNNVDTGLGYEGRDR-------ERDLDIGYAVQSGALK 383

Query: 420 NLGVAWKNAMWRTDIAGARDQDENRLIVSYS 450
            LG+  +NAM R++     D DENRL + Y+
Sbjct: 384 GLGIRVRNAMARSNYRS--DIDENRLTLVYT 412