Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 410 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  267 bits (683), Expect = 4e-76
 Identities = 164/451 (36%), Positives = 231/451 (51%), Gaps = 53/451 (11%)

Query: 5   TLALAVALGAIAQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGANKNEEWGQGFDLRFI 64
           T ALA +L     QA A GFV+D+KA+L LRNFY+N D        K EEW Q F   F 
Sbjct: 12  TFALAASLPL---QALAEGFVDDAKASLTLRNFYMNRDYTGTASQGKAEEWTQSFIFDFK 68

Query: 65  SGYTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVNDYS 124
           SGYT G VGFGVD +GL  ++LD G GT G               + P   +G+  +D+ 
Sbjct: 69  SGYTPGVVGFGVDVLGLYSIKLDGGKGTAGT-------------QLLPVHDDGRPADDFG 115

Query: 125 SLGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIE 184
              L  K ++S+TELK+G   P LP++  +DGR LPQT QG Q+T+N++  L+L GGQ  
Sbjct: 116 RTALAGKMRVSRTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFR 175

Query: 185 KAKGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLT-AQYYYGNLEDFYKQ 243
           +   RN +S +++SL        T   S++F +AGG+Y+  ++ T    +Y  LED Y+Q
Sbjct: 176 QNSPRNDASMQDMSLF-----TRTAFTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQ 230

Query: 244 HFLGLTHNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLYSG 303
            +  + H   +G  VL ++L YF   DDG                  A  G+++N   SG
Sbjct: 231 RYFQVQHQQPLGNWVLGANLGYFWGKDDGG-----------------AKAGELNNRTASG 273

Query: 304 LFLYTVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARYAY 363
           LF   + G+TF  G Q   G  D  W      S   L  D     +  A ER+WQ R+ +
Sbjct: 274 LFSAKLGGNTFYVGLQKVMG--DDEWFRVNGASGGTLANDAFGSSYESARERSWQVRHDF 331

Query: 364 DFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEGPLKNLGV 423
           +F  +G+PGLT    Y+ G ++            +  S   R+  +AYV+  GP K L +
Sbjct: 332 NFVVLGIPGLTLMNRYIHGYNV------------HNASTQGRESELAYVVQSGPFKALNL 379

Query: 424 AWKNAMWRTDIAGARDQDENRLIVSYSIPLL 454
            W+N+  R D       DENRLIVSY + LL
Sbjct: 380 KWRNSSQRRDWGSTNSFDENRLIVSYPLSLL 410