Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  338 bits (867), Expect = 2e-97
 Identities = 189/444 (42%), Positives = 259/444 (58%), Gaps = 57/444 (12%)

Query: 19  AGAAGFVEDSKATLGLRNFYINTDNRN---------GTGANKNEEWGQGFDLRFISGYTQ 69
           AGAAGF+EDSK  L LRN Y N + R+          T  ++  EW QGF L + SG+TQ
Sbjct: 21  AGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFTQ 80

Query: 70  GTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVNDYSSLGLT 129
           GT+G GVDA+GLLGVRLDSG G +G               + P   +G+A ++++S G+T
Sbjct: 81  GTLGLGVDAMGLLGVRLDSGRGRSGTG-------------LLPVHDDGRAADEFASAGIT 127

Query: 130 AKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIEKAKGR 189
           AKA++  T +K GTL PK PV++ ND RLLPQT+QG Q+T+ DI +LTL  G +++ K R
Sbjct: 128 AKARLGSTVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQR 187

Query: 190 NSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDFYKQHFLGLT 249
           +SS +  L L G          S  F +AG DY ++K L   Y++G LE FY+Q F GL 
Sbjct: 188 DSSDSTGLYLDGYGGPA-----SGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLV 242

Query: 250 HNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLYSGLFLYTV 309
           H+  +G GVL +DLRYF S D G                  A  G +DN+++SG   Y  
Sbjct: 243 HDLPLGGGVLTTDLRYFKSRDSGT-----------------AYGGGIDNDMFSGQLSYAH 285

Query: 310 AGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARYAYDFAKVG 369
           +GHT G GYQV +G +  P+++   G++ Y  +++ I KF    E+TW A YAY+FA  G
Sbjct: 286 SGHTVGAGYQVLDGEAGLPYIS---GATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAG 342

Query: 370 VPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEGPLKNLGVAWKNAM 429
           VPGLT    YL G +         R+   G  EWERD  +AYV+  GPLK LGV  +N +
Sbjct: 343 VPGLTFMTRYLSGDN--------GRSGGEGIKEWERDAEIAYVVQGGPLKGLGVKLRNYV 394

Query: 430 WRTDIAGARDQDENRLIVSYSIPL 453
           +R+D   AR +D NRL ++Y I +
Sbjct: 395 YRSDF--ARGRDSNRLYLTYDIAI 416